myRT

myRT report for GCA_001653775.1_ASM165377v1

Download annotations/find similar RTs

Seq: CP011775.1 Vibrio vulnificus strain FORC_016 chromosome I, complete sequence (3234424 bp)
Overview 1 RT 1: 369397-374264 bp 2 RT 2: 1693398-1697864 bp Neighborhood of RT #1 [369397, 374264] AlpA Mrr_cat zf-C4_Topoisom RVT-Retrons Neighborhood of RT #2 [1693398, 1697872] VOC_like RVT-Retrons TIR_2 COG3547 Acetyltransf_1 Feature: gene Location: 369397-369561 bp Ori: ANH62227.1 Feature: domain Description: AlpA Location: 369403-369559 bp Feature: domain Description: AlpA Location: 369403-369559 bp Feature: gene Location: 370015-370830 bp Ori: ANH62228.1 Feature: domain Description: Mrr_cat Location: 370315-370645 bp Feature: domain Description: Mrr_cat Location: 37031 5-370645 bp Feature: domain Description: zf-C4_Topoisom Location: 370714-370822 bp Feature: domain Description: zf-C4_Topoisom Location: 37071 4-370822 bp Feature: gene Location: 371521-373461 bp Ori: ANH62229.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 371656-372343 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 371 656-372343 bp Feature: gene Location: 373513-373695 bp Feature: gene Location: 374007-374264 bp Feature: gene Location: 1693398-1693766 bp Ori: ANH63410.1 Feature: domain Description: VOC_like Location: 1693407-1693758 bp Feature: domain Description: VOC_like Location: 1 693407-1 693758 bp Feature: gene Location: 1693966-1694187 bp Feature: gene Location: 1694321-1695916 bp Ori: ANH63412.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1694573-1695185 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 694573-1 6951 85 bp Feature: domain Description: TIR_2 Location: 1695521-1695905 bp Feature: domain Description: TIR_2 Location: 1 695521 -1 695905 bp Feature: gene Location: 1696458-1697414 bp Ori: ANH63413.1 Feature: domain Description: COG3547 Location: 1696491-1697385 bp Feature: domain Description: COG3547 Location: 1 696491 -1 697385 bp Feature: gene Location: 1697495-1697872 bp Ori: ANH63414.1 Feature: domain Description: Acetyltransf_1 Location: 1697639-1697864 bp Feature: domain Description: Acetyltransf_1 Location: 1 697639-1 697864 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AlpA (COG3311), Mrr_cat (pfam04471), zf-C4_Topoisom (pfam01396), RVT-Retrons, VOC_like (cd16355), TIR_2 (pfam13676), COG3547 (Transposase ), Acetyltransf_1 (pfam00583)