myRT

myRT report for GCA_001663195.1_ASM166319v1

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Seq: CP015991.1 Klebsiella pneumoniae strain BR plasmid pWSZBR, complete sequence (76251 bp)
Overview 1 RT 1: 50475-56471 bp Neighborhood of RT #1 [50475, 56488] DDE_Tnp_1_5 DDE_Tnp_IS1 RVT-GII PRK10276 Feature: gene Location: 50475-51398 bp Ori: ANK19487.1 Feature: domain Description: DDE_Tnp_1_5 Location: 50532-50865 bp Feature: domain Description: DDE_Tnp_1 _5 Location: 50532-50865 bp Feature: gene Location: 53315-53818 bp Ori: ANK19458.1 Feature: domain Description: DDE_Tnp_IS1 Location: 53426-53816 bp Feature: domain Description: DDE_Tnp_IS1 Location: 53426-5381 6 bp Feature: gene Location: 54164-55174 bp Ori: ANK19459.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54170-54782 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 541 70-54782 bp Feature: gene Location: 55286-55480 bp Feature: gene Location: 56057-56488 bp Ori: ANK19460.1 Feature: domain Description: PRK10276 Location: 56108-56471 bp Feature: domain Description: PRK1 0276 Location: 561 08-56471 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1_5 (pfam13737), DDE_Tnp_IS1 (pfam03400), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: CP015990.1 Klebsiella pneumoniae strain BR chromosome, complete genome (5344467 bp)
Overview 1 RT 1: 798919-807549 bp 2 RT 2: 2136373-2143972 bp 3 RT 3: 3248926-3254290 bp Neighborhood of RT #1 [798919, 807554] FimC FimD RVT-UG4 PRK09692 YqgA Neighborhood of RT #2 [2136373, 2143974] PinE RVT-GII PRK10276 umuC Neighborhood of RT #3 [3248926, 3254346] umuC PRK10276 RVT-GII DinI GT9_LPS_heptosyltransferase Feature: gene Location: 798919-799683 bp Ori: ANK15132.1 Feature: domain Description: FimC Location: 798964-799666 bp Feature: domain Description: FimC Location: 798964-799666 bp Feature: gene Location: 799730-802324 bp Ori: ANK15133.1 Feature: domain Description: FimD Location: 799772-802313 bp Feature: domain Description: FimD Location: 799772 -802 313 bp Feature: gene Location: 802321-804402 bp Ori: ANK15134.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 802732-803176 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 802 732 -803176 bp Feature: gene Location: 805079-806317 bp Feature: domain Description: PRK09692 Location: 805085-806267 bp Feature: domain Description: PRK09692 Location: 805085-8062 67 bp Feature: gene Location: 806841-807554 bp Ori: ANK15135.1 Feature: domain Description: YqgA Location: 806847-807549 bp Feature: domain Description: YqgA Location: 806847-807549 bp Feature: gene Location: 2136373-2138574 bp Feature: gene Location: 2138666-2139244 bp Ori: ANK16319.1 Feature: domain Description: PinE Location: 2138675-2139215 bp Feature: domain Description: PinE Location: 2 138675-2 1392 15 bp Feature: gene Location: 2140725-2142209 bp Ori: ANK16320.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2141127-2141817 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 14112 7-2 141817 bp Feature: gene Location: 2142288-2142707 bp Ori: ANK19263.1 Feature: domain Description: PRK10276 Location: 2142291-2142702 bp Feature: domain Description: PRK102 76 Location: 2 142 2 91-2 142 702 bp Feature: gene Location: 2142709-2143974 bp Ori: ANK16321.1 Feature: domain Description: umuC Location: 2142712-2143972 bp Feature: domain Description: umuC Location: 2 142 712 -2 143972 bp Feature: gene Location: 3248926-3250191 bp Ori: ANK17333.1 Feature: domain Description: umuC Location: 3248929-3250189 bp Feature: domain Description: umuC Location: 32 4892 9-32 50189 bp Feature: gene Location: 3250194-3250613 bp Ori: ANK17334.1 Feature: domain Description: PRK10276 Location: 3250197-3250608 bp Feature: domain Description: PRK102 76 Location: 32 50197-32 50608 bp Feature: gene Location: 3250692-3252176 bp Ori: ANK17335.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3251094-3251784 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 51094-32 51784 bp Feature: gene Location: 3252794-3253036 bp Ori: ANK17336.1 Feature: domain Description: DinI Location: 3252845-3253025 bp Feature: domain Description: DinI Location: 32 52 845-32 5302 5 bp Feature: gene Location: 3253207-3254346 bp Ori: ANK17337.1 Feature: domain Description: GT9_LPS_heptosyltransferase Location: 3253390-3254290 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 32 53390-32 542 90 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, PRK09692 (Integrase; provisional), YqgA (COG1811), PinE (COG1961), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), DinI (pfam06183)
GT9_LPS_heptosyltransferase (cd03789)