myRT

myRT report for GCA_001663295.1_ASM166329v1

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Seq: CP014763.1 Klebsiella pneumoniae strain KPNIH39 plasmid pKPN-332, complete sequence (284894 bp)
Overview 1 RT 1: 41617-46376 bp 2 RT 2: 105159-109711 bp Neighborhood of RT #1 [41617, 46384] InsE RVT-GII GIIM COG3547 PHA02517 Neighborhood of RT #2 [105159, 109722] BLUF PHA02517 RVT-GII GIIM InsE fn3_3 Feature: gene Location: 41617-41919 bp Ori: ANK24764.1 Feature: domain Description: InsE Location: 41626-41908 bp Feature: domain Description: InsE Location: 41 626-41 908 bp Feature: gene Location: 42039-42332 bp Feature: gene Location: 42978-44486 bp Ori: ANK24951.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43236-43968 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43236-43968 bp Feature: domain Description: GIIM Note: maturase Location: 44043-44241 bp Feature: domain Description: GIIM Note: maturase Location: 44043-44241 bp Feature: gene Location: 45028-46104 bp Ori: ANK24766.1 Feature: domain Description: COG3547 Location: 45067-45988 bp Feature: domain Description: COG3547 Location: 45067-45988 bp Feature: gene Location: 46172-46384 bp Ori: ANK24767.1 Feature: domain Description: PHA02517 Location: 46175-46376 bp Feature: domain Description: PHA0251 7 Location: 461 75-46376 bp Feature: gene Location: 105159-105653 bp Feature: domain Description: BLUF Location: 105165-105435 bp Feature: domain Description: BLUF Location: 1 051 65-1 05435 bp Feature: gene Location: 105719-106195 bp Feature: domain Description: PHA02517 Location: 105722-106187 bp Feature: domain Description: PHA0251 7 Location: 1 05722-1 061 87 bp Feature: gene Location: 106276-107784 bp Ori: ANK24955.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 106534-107266 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 06534-1 07266 bp Feature: domain Description: GIIM Note: maturase Location: 107341-107539 bp Feature: domain Description: GIIM Note: maturase Location: 1 07341 -1 07539 bp Feature: gene Location: 108858-109136 bp Ori: ANK24816.1 Feature: domain Description: InsE Location: 108870-109128 bp Feature: domain Description: InsE Location: 1 08870-1 091 28 bp Feature: gene Location: 109324-109722 bp Ori: ANK24817.1 Feature: domain Description: fn3_3 Location: 109498-109711 bp Feature: domain Description: fn3_3 Location: 1 09498-1 0971 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), RVT-GII, GIIM (pfam08388), COG3547 (Transposase ), PHA02517 (putative transposase OrfB; Reviewed), BLUF (smart01034), fn3_3 (pfam14686)

Seq: CP014762.1 Klebsiella pneumoniae strain KPNIH39, complete genome (5351509 bp)
Overview 1 RT 1: 630496-638163 bp 2 RT 2: 4124246-4129634 bp Neighborhood of RT #1 [630496, 638192] Peptidase_M78 IncA RVT-UG5 PRK04247 RMtype1_S_Ppo21ORF8840P_TRD1-CR1_like RMtype1_S_Ppo21ORF8840P_TRD1-CR1_like Neighborhood of RT #2 [4124246, 4129634] RepL RVT-AbiP2 PRK10947 Feature: gene Location: 630496-631041 bp Ori: ANK20113.1 Feature: domain Description: Peptidase_M78 Location: 630646-631009 bp Feature: domain Description: Peptidase_M78 Location: 630646-631009 bp Feature: gene Location: 631044-631718 bp Ori: ANK20114.1 Feature: domain Description: IncA Location: 631335-631677 bp Feature: domain Description: IncA Location: 631335-631677 bp Feature: gene Location: 632166-635183 bp Ori: ANK20115.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 632664-633159 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 632 664-633159 bp Feature: gene Location: 635363-636463 bp Ori: ANK20116.1 Feature: domain Description: PRK04247 Location: 635426-635657 bp Feature: domain Description: PRK042 47 Location: 63542 6-635657 bp Feature: gene Location: 636474-638192 bp Ori: ANK20117.1 Feature: domain Description: RMtype1_S_Ppo21ORF8840P_TRD1-CR1_like Location: 636801-637335 bp Feature: domain Description: RMtype1_S_Ppo2 1ORF8840P_TRD1-CR1_like Location: 636801-637335 bp Feature: domain Description: RMtype1_S_Ppo21ORF8840P_TRD1-CR1_like Location: 637785-638163 bp Feature: domain Description: RMtype1_S_Ppo2 1ORF8840P_TRD1-CR1_like Location: 637785-638163 bp Feature: gene Location: 4124246-4125010 bp Feature: gene Location: 4126313-4126858 bp Ori: ANK23333.1 Feature: domain Description: RepL Location: 4126436-4126808 bp Feature: domain Description: RepL Location: 412 6436-412 6808 bp Feature: gene Location: 4127213-4128757 bp Ori: ANK23334.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 4127642-4128101 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 412 7642 -412 8101 bp Feature: gene Location: 4128954-4129214 bp Ori: ANK23335.1 Feature: domain Description: PRK10947 Location: 4128969-4129191 bp Feature: domain Description: PRK10947 Location: 412 8969-412 9191 bp Feature: gene Location: 4129284-4129634 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Peptidase_M78 (pfam06114), IncA, RVT-UG5, PRK04247 (endonuclease NucS), RMtype1_S_Ppo21ORF8840P_TRD1-CR1_like (cd17293), RepL (pfam05732), RVT-AbiP2, PRK10947 (DNA-binding transcriptional regulator H-NS)