myRT

myRT report for GCA_001663435.1_ASM166343v1

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Seq: CP015026.1 Klebsiella pneumoniae strain Kpn223 plasmid pKPN-065, complete sequence (170926 bp)
Overview 1 RT 1: 134349-139361 bp Neighborhood of RT #1 [134349, 139361] HHA RVT-GII INT_Cre_C Feature: gene Location: 134349-135416 bp Feature: gene Location: 135502-135756 bp Ori: ANK44756.1 Feature: domain Description: HHA Location: 135553-135736 bp Feature: domain Description: HHA Location: 1 35553-1 35736 bp Feature: gene Location: 136272-137756 bp Ori: ANK44757.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 136674-137364 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 36674-1 37364 bp Feature: gene Location: 137842-138978 bp Ori: ANK44758.1 Feature: domain Description: INT_Cre_C Location: 138265-138919 bp Feature: domain Description: INT_Cre_C Location: 1 38265-1 3891 9 bp Feature: gene Location: 139044-139361 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HHA (pfam05321), RVT-GII, INT_Cre_C (cd00799)

Seq: CP015025.1 Klebsiella pneumoniae strain Kpn223, complete genome (5365209 bp)
Overview 1 RT 1: 2244692-2248817 bp 2 RT 2: 3792996-3797520 bp 3 RT 3: 4656147-4659205 bp Neighborhood of RT #1 [2244692, 2248819] PinE RVT-GII PRK10276 umuC Neighborhood of RT #2 [3792996, 3797520] PRK10276 RVT-GII PinE Neighborhood of RT #3 [4656147, 4659207] RVT-Retrons DinI Feature: gene Location: 2244692-2244961 bp Ori: ANK44538.1 Feature: domain Description: PinE Location: 2244761-2244953 bp Feature: domain Description: PinE Location: 2 2 44761-2 2 44953 bp Feature: gene Location: 2245569-2247053 bp Ori: ANK41528.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2245971-2246661 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 45971-2 2 46661 bp Feature: gene Location: 2247133-2247552 bp Ori: ANK44539.1 Feature: domain Description: PRK10276 Location: 2247136-2247547 bp Feature: domain Description: PRK102 76 Location: 2 2 47136-2 2 47547 bp Feature: gene Location: 2247554-2248819 bp Ori: ANK41529.1 Feature: domain Description: umuC Location: 2247557-2248817 bp Feature: domain Description: umuC Location: 2 2 47557-2 2 48817 bp Feature: gene Location: 3792996-3793316 bp Ori: ANK42948.1 Feature: domain Description: PRK10276 Location: 3792999-3793293 bp Feature: domain Description: PRK102 76 Location: 3792 999-37932 93 bp Feature: gene Location: 3793319-3793558 bp Feature: gene Location: 3793636-3795120 bp Ori: ANK42950.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3794038-3794728 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3794038-379472 8 bp Feature: gene Location: 3795574-3796125 bp Ori: ANK42951.1 Feature: domain Description: PinE Location: 3795577-3796117 bp Feature: domain Description: PinE Location: 3795577-3796117 bp Feature: gene Location: 3796294-3797520 bp Feature: gene Location: 4656147-4656341 bp Feature: gene Location: 4656340-4656771 bp Feature: gene Location: 4656910-4657860 bp Ori: ANK43767.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4657090-4657633 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4657090-4657633 bp Feature: gene Location: 4657948-4658148 bp Feature: gene Location: 4658767-4659207 bp Ori: ANK43769.1 Feature: domain Description: DinI Location: 4659022-4659205 bp Feature: domain Description: DinI Location: 465902 2 -46592 05 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), RVT-Retrons, DinI (pfam06183)