myRT

myRT report for GCA_001663475.1_ASM166347v1

Download annotations/find similar RTs

Seq: CP015159.1 Escherichia coli strain Eco889 chromosome, complete genome (5012253 bp)
Overview 1 RT 1: 555439-561833 bp 2 RT 2: 2845999-2852853 bp 3 RT 3: 4711538-4715756 bp Neighborhood of RT #1 [555439, 561856] PFLE_PFLC RVT-GII RVT-GII GIIM YesM YesN YesN Neighborhood of RT #2 [2845999, 2852853] PRK11388 RVT-Retrons Neighborhood of RT #3 [4711538, 4715767] FaeA PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 555439-556356 bp Ori: ANK50809.1 Feature: domain Description: PFLE_PFLC Location: 555475-556330 bp Feature: domain Description: PFLE_PFLC Location: 555475-556330 bp Feature: gene Location: 556493-557398 bp Feature: gene Location: 557884-558423 bp Ori: ANK50811.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 558214-558292 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55821 4-558292 bp Feature: gene Location: 558451-558972 bp Ori: ANK50812.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 558457-558739 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 558457-558739 bp Feature: domain Description: GIIM Note: maturase Location: 558787-558967 bp Feature: domain Description: GIIM Note: maturase Location: 558787-558967 bp Feature: gene Location: 559555-560784 bp Ori: ANK50813.1 Feature: domain Description: YesM Location: 560035-560776 bp Feature: domain Description: YesM Location: 560035-560776 bp Feature: gene Location: 560801-561856 bp Ori: ANK50814.1 Feature: domain Description: YesN Location: 560804-561194 bp Feature: domain Description: YesN Location: 560804-561 1 94 bp Feature: domain Description: YesN Location: 561536-561833 bp Feature: domain Description: YesN Location: 561 536-561 833 bp Feature: gene Location: 2845999-2847918 bp Ori: ANK52903.1 Feature: domain Description: PRK11388 Location: 2846002-2847910 bp Feature: domain Description: PRK1 1 388 Location: 2846002-284791 0 bp Feature: gene Location: 2847955-2848185 bp Feature: gene Location: 2849210-2850967 bp Ori: ANK52905.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2849354-2849972 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2849354-2849972 bp Feature: gene Location: 2851214-2852341 bp Feature: gene Location: 2852338-2852853 bp Feature: gene Location: 4711538-4711771 bp Ori: ANK54582.1 Feature: domain Description: FaeA Location: 4711553-4711730 bp Feature: domain Description: FaeA Location: 471 1 553-471 1 730 bp Feature: gene Location: 4712335-4712745 bp Feature: domain Description: PHA02517 Location: 4712338-4712743 bp Feature: domain Description: PHA0251 7 Location: 471 2338-471 2743 bp Feature: gene Location: 4712898-4714406 bp Ori: ANK55054.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4713156-4713888 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 471 31 56-471 3888 bp Feature: domain Description: GIIM Note: maturase Location: 4713963-4714161 bp Feature: domain Description: GIIM Note: maturase Location: 471 3963-471 41 61 bp Feature: gene Location: 4715013-4715438 bp Ori: ANK54583.1 Feature: domain Description: PHA02517 Location: 4715037-4715373 bp Feature: domain Description: PHA0251 7 Location: 471 5037-471 5373 bp Feature: gene Location: 4715465-4715767 bp Ori: ANK54584.1 Feature: domain Description: InsE Location: 4715474-4715756 bp Feature: domain Description: InsE Location: 471 5474-471 5756 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PFLE_PFLC (TIGR02494), RVT-GII, GIIM (pfam08388), YesM (COG2972), YesN (COG4753), PRK11388 (DNA-binding transcriptional regulator DhaR; Provisional), RVT-Retrons, FaeA (pfam04703), PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963)

Seq: CP015160.1 Escherichia coli strain Eco889 plasmid pECO-fce, complete sequence (212180 bp)
Overview 1 RT 1: 12478-15572 bp 2 RT 2: 27418-30093 bp Neighborhood of RT #1 [12478, 15572] InsE PHA02517 RVT-GII GIIM Neighborhood of RT #2 [27418, 30101] InsE PHA02517 RVT-GII PRK10173 PRK10173 Feature: gene Location: 12478-12882 bp Ori: ANK55082.1 Feature: domain Description: InsE Location: 12508-12844 bp Feature: domain Description: InsE Location: 12 508-12 844 bp Feature: gene Location: 12911-13300 bp Feature: domain Description: PHA02517 Location: 12914-13256 bp Feature: domain Description: PHA02 517 Location: 12 914-132 56 bp Feature: gene Location: 13384-14892 bp Ori: ANK55296.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13642-14374 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13642 -14374 bp Feature: domain Description: GIIM Note: maturase Location: 14449-14647 bp Feature: domain Description: GIIM Note: maturase Location: 14449-14647 bp Feature: gene Location: 14861-15286 bp Feature: gene Location: 15201-15572 bp Feature: gene Location: 27418-27744 bp Ori: ANK55096.1 Feature: domain Description: InsE Location: 27421-27742 bp Feature: domain Description: InsE Location: 2 742 1-2 7742 bp Feature: gene Location: 27744-28223 bp Ori: ANK55097.1 Feature: domain Description: PHA02517 Location: 27804-28158 bp Feature: domain Description: PHA02 517 Location: 2 7804-2 8158 bp Feature: gene Location: 28830-29318 bp Ori: ANK55299.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29088-29160 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 9088-2 9160 bp Feature: gene Location: 29357-29677 bp Ori: ANK55098.1 Feature: domain Description: PRK10173 Location: 29360-29588 bp Feature: domain Description: PRK10173 Location: 2 9360-2 9588 bp Feature: gene Location: 29652-30101 bp Ori: ANK55099.1 Feature: domain Description: PRK10173 Location: 29655-30093 bp Feature: domain Description: PRK10173 Location: 2 9655-30093 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional)