myRT

myRT report for GCA_001675125.1_ASM167512v1

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Seq: CP014647.1 Klebsiella pneumoniae strain KPNIH36, complete genome (5393897 bp)
Overview 1 RT 1: 1334559-1337966 bp 2 RT 2: 1775905-1781453 bp 3 RT 3: 2119590-2125008 bp 4 RT 4: 2272238-2278103 bp 5 RT 5: 3514614-3521097 bp Neighborhood of RT #1 [1334559, 1338067] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #2 [1775905, 1781479] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Neighborhood of RT #3 [2119590, 2125010] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [2272238, 2278105] Rve PinE RVT-GII PRK10276 umuC Neighborhood of RT #5 [3514614, 3521099] YccC PRK10016 RVT-GII dacD SbcB Feature: gene Location: 1334559-1335290 bp Ori: ANK26376.1 Feature: domain Description: Laminin_G_3 Location: 1334880-1335234 bp Feature: domain Description: Laminin_G_3 Location: 1 334880-1 335234 bp Feature: gene Location: 1335287-1335496 bp Feature: gene Location: 1335949-1337433 bp Ori: ANK26378.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1336351-1337041 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 336351 -1 337041 bp Feature: gene Location: 1337511-1337750 bp Feature: gene Location: 1337750-1338067 bp Ori: ANK26380.1 Feature: domain Description: PRK10276 Location: 1337756-1337870 bp Feature: domain Description: PRK1 0276 Location: 1 337756-1 337870 bp Feature: domain Description: PRK10276 Location: 1337897-1337966 bp Feature: domain Description: PRK1 0276 Location: 1 337897-1 337966 bp Feature: gene Location: 1775905-1776468 bp Ori: ANK26775.1 Feature: domain Description: YbjK Location: 1775911-1776448 bp Feature: domain Description: YbjK Location: 1 77591 1 -1 776448 bp Feature: gene Location: 1776591-1777643 bp Ori: ANK26776.1 Feature: domain Description: int Location: 1776594-1777593 bp Feature: domain Description: int Location: 1 776594-1 777593 bp Feature: gene Location: 1778062-1779546 bp Ori: ANK26777.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1778464-1779154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 778464-1 7791 54 bp Feature: gene Location: 1779645-1780589 bp Feature: gene Location: 1780601-1781479 bp Ori: ANK26779.1 Feature: domain Description: Phage_CI_repr Location: 1780628-1780811 bp Feature: domain Description: Phage_CI_repr Location: 1 780628-1 78081 1 bp Feature: domain Description: Phage_CI_repr Location: 1780940-1781132 bp Feature: domain Description: Phage_CI_repr Location: 1 780940-1 781 1 32 bp Feature: domain Description: Phage_CI_C Location: 1781159-1781453 bp Feature: domain Description: Phage_CI_C Location: 1 781 1 59-1 781 453 bp Feature: gene Location: 2119590-2120729 bp Ori: ANK27103.1 Feature: domain Description: GT9_LPS_heptosyltransferase Location: 2119773-2120673 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 21 1 9773-21 20673 bp Feature: gene Location: 2120900-2121142 bp Ori: ANK27104.1 Feature: domain Description: DinI Location: 2120951-2121131 bp Feature: domain Description: DinI Location: 21 20951 -21 21 1 31 bp Feature: gene Location: 2121760-2123244 bp Ori: ANK27105.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2122162-2122852 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 221 62-21 22852 bp Feature: gene Location: 2123323-2123742 bp Ori: ANK27106.1 Feature: domain Description: PRK10276 Location: 2123326-2123737 bp Feature: domain Description: PRK1 0276 Location: 21 23326-21 23737 bp Feature: gene Location: 2123745-2125010 bp Ori: ANK27107.1 Feature: domain Description: umuC Location: 2123748-2125008 bp Feature: domain Description: umuC Location: 21 23748-21 25008 bp Feature: gene Location: 2272238-2272942 bp Ori: ANK27248.1 Feature: domain Description: Rve Location: 2272241-2272886 bp Feature: domain Description: Rve Location: 2272241 -2272886 bp Feature: gene Location: 2272948-2273457 bp Ori: ANK27249.1 Feature: domain Description: PinE Location: 2272996-2273449 bp Feature: domain Description: PinE Location: 2272996-2273449 bp Feature: gene Location: 2274855-2276339 bp Ori: ANK27250.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2275257-2275947 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2275257-2275947 bp Feature: gene Location: 2276419-2276838 bp Ori: ANK30332.1 Feature: domain Description: PRK10276 Location: 2276422-2276833 bp Feature: domain Description: PRK1 0276 Location: 2276422-2276833 bp Feature: gene Location: 2276840-2278105 bp Ori: ANK27251.1 Feature: domain Description: umuC Location: 2276843-2278103 bp Feature: domain Description: umuC Location: 2276843-22781 03 bp Feature: gene Location: 3514614-3515672 bp Ori: ANK28456.1 Feature: domain Description: YccC Location: 3514620-3515658 bp Feature: domain Description: YccC Location: 351 4620-351 5658 bp Feature: gene Location: 3515771-3516244 bp Ori: ANK28457.1 Feature: domain Description: PRK10016 Location: 3515774-3516233 bp Feature: domain Description: PRK1 001 6 Location: 351 5774-351 6233 bp Feature: gene Location: 3516326-3517810 bp Ori: ANK28458.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3516728-3517418 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 351 6728-351 741 8 bp Feature: gene Location: 3518331-3519494 bp Ori: ANK30387.1 Feature: domain Description: dacD Location: 3518334-3519489 bp Feature: domain Description: dacD Location: 351 8334-351 9489 bp Feature: gene Location: 3519675-3521099 bp Ori: ANK28459.1 Gene: sbcB Feature: domain Description: SbcB Location: 3519681-3521097 bp Feature: domain Description: SbcB Location: 351 9681 -3521 097 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Laminin_G_3 (pfam13385), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), umuC (PRK03609)
Rve (COG3316), PinE (COG1961), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397), SbcB (COG2925)

Seq: CP014649.1 Klebsiella pneumoniae strain KPNIH36 plasmid pKPN-fff, complete sequence (133484 bp)
Overview 1 RT 1: 17229-22220 bp Neighborhood of RT #1 [17229, 22225] Antirestrict RVT-GII PRK10276 umuC Feature: gene Location: 17229-17654 bp Ori: ANK30507.1 Feature: domain Description: Antirestrict Location: 17364-17652 bp Feature: domain Description: Antirestrict Location: 17364-17652 bp Feature: gene Location: 18175-18405 bp Feature: gene Location: 18639-20123 bp Ori: ANK30509.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19041-19731 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19041-19731 bp Feature: gene Location: 20529-20954 bp Ori: ANK30510.1 Feature: domain Description: PRK10276 Location: 20532-20940 bp Feature: domain Description: PRK102 76 Location: 2 0532 -2 0940 bp Feature: gene Location: 20954-22225 bp Ori: ANK30511.1 Feature: domain Description: umuC Location: 20957-22220 bp Feature: domain Description: umuC Location: 2 0957-2 2 2 2 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Antirestrict (pfam03230), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)