myRT

myRT report for GCA_001675145.1_ASM167514v1

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Seq: CP014668.1 Escherichia coli strain ECONIH2 plasmid pECO-bc6, complete sequence (101201 bp)
Overview 1 RT 1: 14253-20443 bp Neighborhood of RT #1 [14253, 20481] PRK10173 PRK10173 RVT-GII InsE PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 14253-14702 bp Ori: ANK35602.1 Feature: domain Description: PRK10173 Location: 14256-14694 bp Feature: domain Description: PRK1 01 73 Location: 1 4256-1 4694 bp Feature: gene Location: 14677-14997 bp Ori: ANK35603.1 Feature: domain Description: PRK10173 Location: 14680-14908 bp Feature: domain Description: PRK1 01 73 Location: 1 4680-1 4908 bp Feature: gene Location: 15036-15524 bp Ori: ANK35604.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15294-15363 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5294-1 5363 bp Feature: gene Location: 15493-15918 bp Feature: gene Location: 15833-16204 bp Feature: gene Location: 16697-16981 bp Ori: ANK35701.1 Feature: domain Description: InsE Location: 16748-16979 bp Feature: domain Description: InsE Location: 1 6748-1 6979 bp Feature: gene Location: 16981-17460 bp Ori: ANK35607.1 Feature: domain Description: PHA02517 Location: 17041-17395 bp Feature: domain Description: PHA0251 7 Location: 1 7041 -1 7395 bp Feature: gene Location: 18067-19575 bp Ori: ANK35608.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18325-19057 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 8325-1 9057 bp Feature: domain Description: GIIM Note: maturase Location: 19132-19330 bp Feature: domain Description: GIIM Note: maturase Location: 1 91 32-1 9330 bp Feature: gene Location: 19659-20048 bp Feature: domain Description: PHA02517 Location: 19662-20004 bp Feature: domain Description: PHA0251 7 Location: 1 9662-20004 bp Feature: gene Location: 20077-20481 bp Ori: ANK35609.1 Feature: domain Description: InsE Location: 20107-20443 bp Feature: domain Description: InsE Location: 201 07-20443 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional), RVT-GII, InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), GIIM (pfam08388)

Seq: CP014667.1 Escherichia coli strain ECONIH2, complete genome (5116831 bp)
Overview 1 RT 1: 2989912-2994436 bp Neighborhood of RT #1 [2989912, 2994585] HTH_29 HTH_33 DDE_3 RVT-AbiP2 PRK09183 COG4584 Feature: gene Location: 2989912-2990298 bp Feature: gene Location: 2990236-2991273 bp Ori: ANK33467.1 Feature: domain Description: HTH_29 Location: 2990332-2990503 bp Feature: domain Description: HTH_2 9 Location: 2 990332 -2 990503 bp Feature: domain Description: HTH_33 Location: 2990536-2990698 bp Feature: domain Description: HTH_33 Location: 2 990536-2 990698 bp Feature: domain Description: DDE_3 Location: 2990740-2991169 bp Feature: domain Description: DDE_3 Location: 2 990740-2 991169 bp Feature: gene Location: 2991375-2992745 bp Ori: ANK33468.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2991636-2992092 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2 991636-2 992 092 bp Feature: gene Location: 2992784-2993563 bp Ori: ANK33469.1 Feature: domain Description: PRK09183 Location: 2992790-2993561 bp Feature: domain Description: PRK09183 Location: 2 992 790-2 993561 bp Feature: gene Location: 2993563-2994585 bp Ori: ANK33470.1 Feature: domain Description: COG4584 Location: 2993566-2994436 bp Feature: domain Description: COG4584 Location: 2 993566-2 994436 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_29 (pfam13551), HTH_33 (pfam13592), DDE_3 (pfam13358), RVT-AbiP2, PRK09183 (transposase/IS protein; Provisional), COG4584 (Transposase )