myRT

myRT report for GCA_001679785.1_ASM167978v1

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Seq: CP016290.1 Rhizobium leguminosarum strain Vaf10 plasmid unnamed3, complete sequence (557598 bp) Associated domains: RVT_N (pfam13655), RVT-GII, YkfC (COG3344), WGR (smart00773), COG5489 (Uncharacterized conserved protein, DUF736 family )

Seq: CP016293.1 Rhizobium leguminosarum strain Vaf10 plasmid unnamed5, complete sequence (274981 bp) Associated domains: HTH_32 (pfam13565), DDE_3 (pfam13358), lexA (TIGR00498), RVT-GII, GIIM (pfam08388), DDE_Tnp_1_4 (pfam13701)

Seq: CP016288.1 Rhizobium leguminosarum strain Vaf10 plasmid unnamed7, complete sequence (247808 bp) Associated domains: LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), WGR_MMR_like (cd07996), HU_IHF (cl00257), MviM (COG0673)
MalK (COG3839), GIIM (pfam08388), DDE_Tnp_1_4 (pfam13701), Tar (COG0840), PRK13946 (shikimate kinase; Provisional)

Seq: CP016286.1 Rhizobium leguminosarum strain Vaf10 chromosome, complete genome (5035299 bp) Associated domains: COG4731 (Uncharacterized conserved protein, DUF2147 family ), TPR (smart00028), RVT-GII, GIIM (pfam08388), rve (pfam00665), DDE_Tnp_1_4 (pfam13701), IstB_IS21_ATP (pfam08483), IstB_IS21 (pfam01695), PHA02517 (putative transposase OrfB; Reviewed), Phage_int_SAM_1 (pfam02899)
INT_C_like_1 (cd01184)

Seq: CP016287.1 Rhizobium leguminosarum strain Vaf10 plasmid unnamed1, complete sequence (1254530 bp) Associated domains: AraH (COG1172), PBP1_ABC_sugar_binding_like_4, RVT-GII, GIIM (pfam08388), DDE_Tnp_1_4 (pfam13701), DapA (COG0329), UvrD (COG0210), YbjD (COG3593), benzyl_alcohol_DH (cd08278), SsuD (COG2141)
PccA (COG4770), PRK10549 (two-component system sensor histidine kinase BaeS), Rve (COG3316), PHA02517 (putative transposase OrfB; Reviewed)