myRT

myRT report for GCA_001686985.1_ASM168698v1

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Seq: CP015318.1 Mesorhizobium amorphae CCNWGS0123, complete genome (6268270 bp)
Overview 1 RT 1: 1551486-1558524 bp Neighborhood of RT #1 [1551486, 1558524] GIY-YIG_EndoII_Hpy188I_like RVT-Retrons DUF4263 Feature: gene Location: 1551486-1551965 bp Ori: ANT49755.1 Feature: domain Description: GIY-YIG_EndoII_Hpy188I_like Location: 1551621-1551900 bp Feature: domain Description: GIY-YIG_EndoII_Hpy1 88I_like Location: 1 551 621 -1 551 900 bp Feature: gene Location: 1552133-1552831 bp Feature: gene Location: 1553399-1555132 bp Ori: ANT49757.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1553546-1554176 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 553546-1 5541 76 bp Feature: gene Location: 1555324-1556484 bp Ori: ANT49758.1 Feature: domain Description: DUF4263 Location: 1555939-1556452 bp Feature: domain Description: DUF4263 Location: 1 555939-1 556452 bp Feature: gene Location: 1557382-1558524 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIY-YIG_EndoII_Hpy188I_like (cd10436), RVT-Retrons, DUF4263 (pfam14082)

Seq: CP015322.1 Mesorhizobium amorphae CCNWGS0123 plasmid pM0123d, complete sequence (948568 bp)
Overview 1 RT 1: 896583-903157 bp Neighborhood of RT #1 [896583, 903396] IS5 rve RVT-GII PcbC SmtA Feature: gene Location: 896583-896777 bp Ori: ANT54907.1 Feature: domain Description: IS5 Location: 896589-896769 bp Feature: domain Description: IS5 Location: 896589-896769 bp Feature: gene Location: 897014-898528 bp Ori: ANT54908.1 Feature: domain Description: rve Location: 897521-897854 bp Feature: domain Description: rve Location: 89752 1-897854 bp Feature: gene Location: 898773-900033 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 898989-899379 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 898989-899379 bp Feature: gene Location: 901251-902030 bp Ori: ANT54909.1 Feature: domain Description: PcbC Location: 901305-901908 bp Feature: domain Description: PcbC Location: 901305-901908 bp Feature: gene Location: 902542-903396 bp Ori: ANT54910.1 Feature: domain Description: SmtA Location: 902626-903157 bp Feature: domain Description: SmtA Location: 902 62 6-903157 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IS5 (COG3039), rve (pfam00665), RVT-GII, PcbC (COG3491), SmtA (COG0500)