myRT

myRT report for GCA_001688685.2_ASM168868v2

Download annotations/find similar RTs

Seq: CP015408.2 Lactobacillus reuteri strain I49, complete genome (2044771 bp)
Overview 1 RT 1: 271511-277159 bp 2 RT 2: 378971-385497 bp 3 RT 3: 728451-735029 bp 4 RT 4: 995169-1001045 bp 5 RT 5: 1097622-1102315 bp 6 RT 6: 1213297-1220081 bp 7 RT 7: 1324604-1328346 bp 8 RT 8: 1469239-1474972 bp 9 RT 9: 1546273-1553758 bp 10 RT 10: 1713133-1720534 bp 11 RT 11: 1731564-1743724 bp Neighborhood of RT #1 [271511, 277170] PRK00110 RVT-GII GIIM PulE PulF Neighborhood of RT #2 [378971, 385502] rpsO RnjA RVT-GII GIIM PRK12736 Neighborhood of RT #3 [728451, 735058] MazE RVT-UG2 YegV_kinase_like SLC-NCS1sbd_CobB-like Neighborhood of RT #4 [995169, 1001083] PRK09263 MFS_LmrB_MDR_like RVT-GII GIIM HTH_38 INT_C_like_3 Neighborhood of RT #5 [1097622, 1102329] DUF3021 PGRP RVT-GII GIIM AdaB Nitroreductase Neighborhood of RT #6 [1213297, 1220092] DUF2252 galactose_mutarotase_like RVT-GII DacC Neighborhood of RT #7 [1324604, 1328426] PRK13690 RVT-GII GIIM SpoU RelB_DinJ Neighborhood of RT #8 [1469239, 1474980] Tra8 HTH_ASNC RVT-GII GIIM gltP DedA Neighborhood of RT #9 [1546273, 1553766] MdoB gldA RVT-GII GIIM DUF915 DacC Neighborhood of RT #10 [1713133, 1720534] DUF3290 HATPase_AgrC-ComD-like LytT RVT-GII GIIM bacteriocin_ABC Neighborhood of RT #11 [1731564, 1743750] Acetyltransf_1 bac_cardiolipin RVT-GII GIIM addB_Gpos addA_Gpos addA_Gpos Feature: gene Location: 271511-272356 bp Feature: gene Location: 272431-273177 bp Ori: ANU51019.1 Feature: domain Description: PRK00110 Location: 272434-273160 bp Feature: domain Description: PRK001 1 0 Location: 272434-2731 60 bp Feature: gene Location: 273677-275059 bp Ori: ANU51020.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 273995-274613 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 273995-27461 3 bp Feature: domain Description: GIIM Note: maturase Location: 274667-274895 bp Feature: domain Description: GIIM Note: maturase Location: 274667-274895 bp Feature: gene Location: 275205-276182 bp Ori: ANU51021.1 Feature: domain Description: PulE Location: 275241-276024 bp Feature: domain Description: PulE Location: 275241 -276024 bp Feature: gene Location: 276100-277170 bp Ori: ANU51022.1 Feature: domain Description: PulF Location: 276172-277159 bp Feature: domain Description: PulF Location: 2761 72-2771 59 bp Feature: gene Location: 378971-379240 bp Ori: ANU51112.1 Feature: domain Description: rpsO Location: 378974-379238 bp Feature: domain Description: rpsO Location: 378974-379238 bp Feature: gene Location: 379421-381202 bp Ori: ANU51113.1 Feature: domain Description: RnjA Location: 379430-381071 bp Feature: domain Description: RnjA Location: 379430-381 071 bp Feature: gene Location: 381715-383097 bp Ori: ANU51114.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 382033-382651 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 382033-382651 bp Feature: domain Description: GIIM Note: maturase Location: 382705-382933 bp Feature: domain Description: GIIM Note: maturase Location: 382705-382933 bp Feature: gene Location: 383228-384133 bp Feature: gene Location: 384312-385502 bp Ori: ANU51116.1 Feature: domain Description: PRK12736 Location: 384321-385497 bp Feature: domain Description: PRK1 2736 Location: 384321 -385497 bp Feature: gene Location: 728451-728699 bp Ori: ANU51418.1 Feature: domain Description: MazE Location: 728463-728697 bp Feature: domain Description: MazE Location: 728463-728697 bp Feature: gene Location: 728892-730319 bp Feature: gene Location: 730792-732252 bp Ori: ANU51420.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 731038-731857 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 731 038-731 857 bp Feature: gene Location: 732807-733688 bp Ori: ANU51421.1 Feature: domain Description: YegV_kinase_like Location: 732825-733674 bp Feature: domain Description: YegV_kinase_like Location: 732825-733674 bp Feature: gene Location: 733685-735058 bp Ori: ANU51422.1 Feature: domain Description: SLC-NCS1sbd_CobB-like Location: 733715-735029 bp Feature: domain Description: SLC-NCS1 sbd_CobB-like Location: 73371 5-735029 bp Feature: gene Location: 995169-997403 bp Ori: ANU51656.1 Feature: domain Description: PRK09263 Location: 995220-997320 bp Feature: domain Description: PRK09263 Location: 995220-997320 bp Feature: gene Location: 997809-999215 bp Ori: ANU51657.1 Feature: domain Description: MFS_LmrB_MDR_like Location: 997872-999192 bp Feature: domain Description: MFS_LmrB_MDR_like Location: 997872-9991 92 bp Feature: gene Location: 999284-1000303 bp Ori: ARE60363.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 999290-999857 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 999290-999857 bp Feature: domain Description: GIIM Note: maturase Location: 999911-1000139 bp Feature: domain Description: GIIM Note: maturase Location: 99991 1 -1 0001 39 bp Feature: gene Location: 1000279-1000642 bp Feature: domain Description: HTH_38 Location: 1000324-1000450 bp Feature: domain Description: HTH_38 Location: 1 000324-1 000450 bp Feature: gene Location: 1000619-1001083 bp Ori: ARE60364.1 Feature: domain Description: INT_C_like_3 Location: 1000703-1001045 bp Feature: domain Description: INT_C_like_3 Location: 1 000703-1 001 045 bp Feature: gene Location: 1097622-1098068 bp Ori: ANU51730.1 Feature: domain Description: DUF3021 Location: 1097643-1098060 bp Feature: domain Description: DUF3021 Location: 1 097643-1 098060 bp Feature: gene Location: 1098076-1098999 bp Ori: ANU51731.1 Feature: domain Description: PGRP Location: 1098514-1098904 bp Feature: domain Description: PGRP Location: 1 09851 4-1 098904 bp Feature: gene Location: 1099335-1100717 bp Ori: ANU51732.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1099653-1100271 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 099653-1 1 00271 bp Feature: domain Description: GIIM Note: maturase Location: 1100325-1100553 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 00325-1 1 00553 bp Feature: gene Location: 1101212-1101661 bp Feature: domain Description: AdaB Location: 1101230-1101650 bp Feature: domain Description: AdaB Location: 1 1 01 230-1 1 01 650 bp Feature: gene Location: 1101676-1102329 bp Ori: ANU51733.1 Feature: domain Description: Nitroreductase Location: 1101688-1102315 bp Feature: domain Description: Nitroreductase Location: 1 1 01 688-1 1 0231 5 bp Feature: gene Location: 1213297-1214694 bp Ori: ANU51840.1 Feature: domain Description: DUF2252 Location: 1213480-1214662 bp Feature: domain Description: DUF2252 Location: 1 21 3480-1 21 4662 bp Feature: gene Location: 1215064-1216101 bp Ori: ANU51841.1 Feature: domain Description: galactose_mutarotase_like Location: 1215118-1216090 bp Feature: domain Description: galactose_mutarotase_like Location: 1 21 51 1 8-1 21 6090 bp Feature: gene Location: 1216203-1217586 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1216521-1217139 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 21 6521 -1 21 71 39 bp Feature: gene Location: 1218084-1218524 bp Feature: gene Location: 1218848-1220092 bp Ori: ANU51843.1 Feature: domain Description: DacC Location: 1218881-1220081 bp Feature: domain Description: DacC Location: 1 21 8881 -1 220081 bp Feature: gene Location: 1324604-1325182 bp Ori: ANU51907.1 Feature: domain Description: PRK13690 Location: 1324625-1325162 bp Feature: domain Description: PRK1 3690 Location: 1 324625-1 3251 62 bp Feature: gene Location: 1325185-1325390 bp Feature: gene Location: 1325789-1327171 bp Ori: ANU51908.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1326107-1326725 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 3261 07-1 326725 bp Feature: domain Description: GIIM Note: maturase Location: 1326779-1327007 bp Feature: domain Description: GIIM Note: maturase Location: 1 326779-1 327007 bp Feature: gene Location: 1327260-1328132 bp Ori: ANU51909.1 Feature: domain Description: SpoU Location: 1327362-1328118 bp Feature: domain Description: SpoU Location: 1 327362-1 3281 1 8 bp Feature: gene Location: 1328214-1328426 bp Ori: ANU51910.1 Feature: domain Description: RelB_DinJ Location: 1328253-1328346 bp Feature: domain Description: RelB_DinJ Location: 1 328253-1 328346 bp Feature: gene Location: 1469239-1470207 bp Ori: ANU52039.1 Feature: domain Description: Tra8 Location: 1469242-1470181 bp Feature: domain Description: Tra8 Location: 1 469242-1 4701 81 bp Feature: gene Location: 1470372-1470842 bp Ori: ANU52040.1 Feature: domain Description: HTH_ASNC Location: 1470375-1470690 bp Feature: domain Description: HTH_ASNC Location: 1 470375-1 470690 bp Feature: gene Location: 1470927-1472309 bp Ori: ANU52041.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1471245-1471863 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 471 245-1 471 863 bp Feature: domain Description: GIIM Note: maturase Location: 1471917-1472145 bp Feature: domain Description: GIIM Note: maturase Location: 1 471 91 7-1 4721 45 bp Feature: gene Location: 1472806-1474119 bp Ori: ANU52042.1 Feature: domain Description: gltP Location: 1472830-1474081 bp Feature: domain Description: gltP Location: 1 472830-1 474081 bp Feature: gene Location: 1474369-1474980 bp Ori: ANU52043.1 Feature: domain Description: DedA Location: 1474372-1474972 bp Feature: domain Description: DedA Location: 1 474372-1 474972 bp Feature: gene Location: 1546273-1548402 bp Ori: ANU52109.1 Feature: domain Description: MdoB Location: 1546285-1548211 bp Feature: domain Description: MdoB Location: 1 546285-1 54821 1 bp Feature: gene Location: 1548561-1549682 bp Ori: ANU52110.1 Feature: domain Description: gldA Location: 1548567-1549653 bp Feature: domain Description: gldA Location: 1 548567-1 549653 bp Feature: gene Location: 1549766-1551148 bp Ori: ANU52111.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1550084-1550702 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 550084-1 550702 bp Feature: domain Description: GIIM Note: maturase Location: 1550756-1550984 bp Feature: domain Description: GIIM Note: maturase Location: 1 550756-1 550984 bp Feature: gene Location: 1551633-1552487 bp Ori: ANU52112.1 Feature: domain Description: DUF915 Location: 1551717-1552485 bp Feature: domain Description: DUF91 5 Location: 1 551 71 7-1 552485 bp Feature: gene Location: 1552555-1553766 bp Ori: ANU52113.1 Feature: domain Description: DacC Location: 1552582-1553758 bp Feature: domain Description: DacC Location: 1 552582-1 553758 bp Feature: gene Location: 1713133-1714446 bp Ori: ANU52257.1 Feature: domain Description: DUF3290 Location: 1713619-1713847 bp Feature: domain Description: DUF3290 Location: 1 71 361 9-1 71 3847 bp Feature: domain Description: HATPase_AgrC-ComD-like Location: 1714036-1714414 bp Feature: domain Description: HATPase_AgrC-ComD-like Location: 1 71 4036-1 71 441 4 bp Feature: gene Location: 1714454-1715221 bp Ori: ANU52258.1 Feature: domain Description: LytT Location: 1714529-1715207 bp Feature: domain Description: LytT Location: 1 71 4529-1 71 5207 bp Feature: gene Location: 1715721-1717103 bp Ori: ANU52259.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1716039-1716657 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 71 6039-1 71 6657 bp Feature: domain Description: GIIM Note: maturase Location: 1716711-1716939 bp Feature: domain Description: GIIM Note: maturase Location: 1 71 671 1 -1 71 6939 bp Feature: gene Location: 1718166-1720307 bp Ori: ANU52260.1 Feature: domain Description: bacteriocin_ABC Location: 1718199-1720302 bp Feature: domain Description: bacteriocin_ABC Location: 1 71 81 99-1 720302 bp Feature: gene Location: 1720349-1720534 bp Feature: gene Location: 1731564-1732190 bp Ori: ANU52269.2 Feature: domain Description: Acetyltransf_1 Location: 1731711-1732056 bp Feature: domain Description: Acetyltransf_1 Location: 1 731 71 1 -1 732056 bp Feature: gene Location: 1732288-1733751 bp Ori: ANU52270.1 Feature: domain Description: bac_cardiolipin Location: 1732309-1733749 bp Feature: domain Description: bac_cardiolipin Location: 1 732309-1 733749 bp Feature: gene Location: 1734246-1735628 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1734564-1735182 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 734564-1 7351 82 bp Feature: domain Description: GIIM Note: maturase Location: 1735236-1735464 bp Feature: domain Description: GIIM Note: maturase Location: 1 735236-1 735464 bp Feature: gene Location: 1735790-1739572 bp Ori: ANU52271.1 Feature: domain Description: addB_Gpos Location: 1735802-1739555 bp Feature: domain Description: addB_Gpos Location: 1 735802-1 739555 bp Feature: gene Location: 1739572-1743750 bp Ori: ANU52272.1 Feature: domain Description: addA_Gpos Location: 1739593-1740574 bp Feature: domain Description: addA_Gpos Location: 1 739593-1 740574 bp Feature: domain Description: addA_Gpos Location: 1740586-1743724 bp Feature: domain Description: addA_Gpos Location: 1 740586-1 743724 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00110 (YebC/PmpR family DNA-binding transcriptional regulator), RVT-GII, GIIM (pfam08388), PulE (COG2804), PulF (COG1459), rpsO (PRK05626), RnjA (COG0595), PRK12736 (elongation factor Tu; Reviewed), MazE (COG2336), RVT-UG2
YegV_kinase_like (cd01944), SLC-NCS1sbd_CobB-like (cd11484), PRK09263 (anaerobic ribonucleoside triphosphate reductase; Provisional), MFS_LmrB_MDR_like (cd17503), HTH_38 (pfam13936), INT_C_like_3 (cd01192), DUF3021 (pfam11457), PGRP (smart00701), AdaB (COG0350), Nitroreductase (pfam00881)
DUF2252 (pfam10009), galactose_mutarotase_like (cd09019), DacC (COG1686), PRK13690 (hypothetical protein; Provisional), SpoU (COG0566), RelB_DinJ (TIGR02384), Tra8 (COG2826), HTH_ASNC (smart00344), gltP (PRK11283), DedA (COG0586)
MdoB (COG1368), gldA (PRK09423), DUF915 (pfam06028), DUF3290 (pfam11694), HATPase_AgrC-ComD-like (cd16935), LytT (COG3279), bacteriocin_ABC (TIGR01193), Acetyltransf_1 (pfam00583), bac_cardiolipin (TIGR04265), addB_Gpos (TIGR02773)
addA_Gpos (TIGR02785)