myRT

myRT report for GCA_001693315.1_ASM169331v1

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Seq: CP016498.1 Escherichia coli strain UPEC 26-1 plasmid unnamed1, complete sequence (151033 bp)
Overview 1 RT 1: 13143-16589 bp 2 RT 2: 36042-40793 bp 3 RT 3: 146736-150671 bp Neighborhood of RT #1 [13143, 16594] RVT-GII GIIM Tra5 InsE Neighborhood of RT #2 [36042, 41178] InsE PHA02517 RVT-GII GIIM PHA02517 IS5 Neighborhood of RT #3 [146736, 150673] PRK09413 PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 13143-13514 bp Feature: gene Location: 13429-13854 bp Feature: gene Location: 13823-15331 bp Ori: ANV97294.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14081-14813 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 4081 -1 481 3 bp Feature: domain Description: GIIM Note: maturase Location: 14891-15086 bp Feature: domain Description: GIIM Note: maturase Location: 1 4891 -1 5086 bp Feature: gene Location: 15560-16298 bp Feature: domain Description: Tra5 Location: 15671-16181 bp Feature: domain Description: Tra5 Location: 1 5671 -1 61 81 bp Feature: gene Location: 16295-16594 bp Ori: ANV97153.1 Feature: domain Description: InsE Location: 16322-16589 bp Feature: domain Description: InsE Location: 1 6322-1 6589 bp Feature: gene Location: 36042-36368 bp Ori: ANV97177.1 Feature: domain Description: InsE Location: 36045-36366 bp Feature: domain Description: InsE Location: 36045-36366 bp Feature: gene Location: 36368-36725 bp Feature: domain Description: PHA02517 Location: 36428-36725 bp Feature: domain Description: PHA0251 7 Location: 36428-36725 bp Feature: gene Location: 37454-38962 bp Ori: ANV97296.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37712-38444 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3771 2-38444 bp Feature: domain Description: GIIM Note: maturase Location: 38519-38717 bp Feature: domain Description: GIIM Note: maturase Location: 3851 9-3871 7 bp Feature: gene Location: 39046-39525 bp Feature: domain Description: PHA02517 Location: 39049-39523 bp Feature: domain Description: PHA0251 7 Location: 39049-39523 bp Feature: gene Location: 40199-41178 bp Feature: domain Description: IS5 Location: 40388-40793 bp Feature: domain Description: IS5 Location: 40388-40793 bp Feature: gene Location: 146736-147101 bp Ori: ANV97306.1 Feature: domain Description: PRK09413 Location: 146739-147099 bp Feature: domain Description: PRK0941 3 Location: 1 46739-1 47099 bp Feature: gene Location: 147191-147670 bp Feature: domain Description: PHA02517 Location: 147194-147668 bp Feature: domain Description: PHA0251 7 Location: 1 471 94-1 47668 bp Feature: gene Location: 147754-149262 bp Ori: ANV97307.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 148012-148744 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 4801 2-1 48744 bp Feature: domain Description: GIIM Note: maturase Location: 148822-149017 bp Feature: domain Description: GIIM Note: maturase Location: 1 48822-1 4901 7 bp Feature: gene Location: 149868-150347 bp Ori: ANV97291.1 Feature: domain Description: PHA02517 Location: 149928-150282 bp Feature: domain Description: PHA0251 7 Location: 1 49928-1 50282 bp Feature: gene Location: 150347-150673 bp Ori: ANV97292.1 Feature: domain Description: InsE Location: 150350-150671 bp Feature: domain Description: InsE Location: 1 50350-1 50671 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Tra5 (COG2801), InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), IS5 (COG3039), PRK09413 (IS2 repressor TnpA; Reviewed)