myRT

myRT report for GCA_001693675.1_ASM169367v1

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Seq: CP016559.1 Streptomyces clavuligerus strain F613-1 chromosome, complete genome (6883702 bp)
Overview 1 RT 1: 3649845-3657206 bp 2 RT 2: 6312340-6316514 bp Neighborhood of RT #1 [3649845, 3657598] AbiEii AbiEii RVT-UNC PRK09694 Cas3_C CRISPR_Cse1 Neighborhood of RT #2 [6312340, 6316600] HTH_23 HTH_33 RVT-GII GIIM pPIWI_RE_X Feature: gene Location: 3649845-3650549 bp Feature: gene Location: 3650236-3651249 bp Feature: domain Description: AbiEii Location: 3650326-3650428 bp Feature: domain Description: AbiEii Location: 3650326-3650428 bp Feature: domain Description: AbiEii Location: 3650755-3650989 bp Feature: domain Description: AbiEii Location: 3650755-3650989 bp Feature: gene Location: 3651278-3652648 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 3651647-3652094 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 3651 647-3652094 bp Feature: gene Location: 3652623-3655673 bp Feature: domain Description: PRK09694 Location: 3652674-3654762 bp Feature: domain Description: PRK09694 Location: 3652674-3654762 bp Feature: domain Description: Cas3_C Location: 3655155-3655461 bp Feature: domain Description: Cas3_C Location: 36551 55-3655461 bp Feature: gene Location: 3655814-3657598 bp Feature: domain Description: CRISPR_Cse1 Location: 3655817-3657206 bp Feature: domain Description: CRISPR_Cse1 Location: 365581 7-3657206 bp Feature: gene Location: 6312340-6312837 bp Feature: domain Description: HTH_23 Location: 6312367-6312490 bp Feature: domain Description: HTH_23 Location: 631 2367-631 2490 bp Feature: domain Description: HTH_33 Location: 6312589-6312760 bp Feature: domain Description: HTH_33 Location: 631 2589-631 2760 bp Feature: gene Location: 6312891-6313139 bp Feature: gene Location: 6313715-6315145 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6314036-6314720 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 631 4036-631 4720 bp Feature: domain Description: GIIM Note: maturase Location: 6314789-6315023 bp Feature: domain Description: GIIM Note: maturase Location: 631 4789-631 5023 bp Feature: gene Location: 6315444-6316160 bp Feature: gene Location: 6316307-6316600 bp Feature: domain Description: pPIWI_RE_X Location: 6316313-6316514 bp Feature: domain Description: pPIWI_RE_X Location: 631 631 3-631 651 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), RVT-UNC/RVT-UG23/RVT-GII/RVT-CRISPR(RVT-UNC), PRK09694 (CRISPR-associated helicase/endonuclease Cas3), Cas3_C (pfam18395), CRISPR_Cse1 (pfam09481), HTH_23 (pfam13384), HTH_33 (pfam13592), RVT-GII, GIIM (pfam08388), pPIWI_RE_X