myRT

myRT report for GCA_001698225.1_ASM169822v1

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Seq: CP016594.1 Gordonia terrae strain 3612 chromosome, complete genome (5701501 bp)
Overview 1 RT 1: 2831771-2839748 bp 2 RT 2: 4517405-4541447 bp Neighborhood of RT #1 [2831771, 2839771] UvrA UvrA DUF772 DDE_Tnp_1_6 RVT-Retrons HGbI_like pimE Neighborhood of RT #2 [4517405, 4541506] AcrR DUF222 RVT-GII GIIM PRK12467 PRK12467 PRK12467 PRK12467 PRK12467 KOG1178 EntF Feature: gene Location: 2831771-2834179 bp Ori: ANY23562.1 Feature: domain Description: UvrA Location: 2831849-2832224 bp Feature: domain Description: UvrA Location: 2831 849-2832224 bp Feature: domain Description: UvrA Location: 2832299-2834171 bp Feature: domain Description: UvrA Location: 2832299-28341 71 bp Feature: gene Location: 2834412-2836166 bp Ori: ANY23563.1 Feature: domain Description: DUF772 Location: 2834577-2834781 bp Feature: domain Description: DUF772 Location: 2834577-2834781 bp Feature: domain Description: DDE_Tnp_1_6 Location: 2835948-2836134 bp Feature: domain Description: DDE_Tnp_1 _6 Location: 2835948-28361 34 bp Feature: gene Location: 2836592-2837863 bp Ori: ANY23564.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2837027-2837630 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2837027-2837630 bp Feature: gene Location: 2837976-2838422 bp Ori: ANY23565.1 Feature: domain Description: HGbI_like Location: 2837991-2838357 bp Feature: domain Description: HGbI_like Location: 2837991 -2838357 bp Feature: gene Location: 2838473-2839771 bp Ori: ANY23566.1 Feature: domain Description: pimE Location: 2838536-2839748 bp Feature: domain Description: pimE Location: 2838536-2839748 bp Feature: gene Location: 4517405-4518058 bp Ori: ANY24794.1 Feature: domain Description: AcrR Location: 4517471-4517993 bp Feature: domain Description: AcrR Location: 451 7471 -451 7993 bp Feature: gene Location: 4518525-4519583 bp Feature: domain Description: DUF222 Location: 4518642-4519524 bp Feature: domain Description: DUF222 Location: 451 8642-451 9524 bp Feature: gene Location: 4520200-4521636 bp Ori: ANY24795.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4520524-4521205 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4520524-4521 205 bp Feature: domain Description: GIIM Note: maturase Location: 4521274-4521502 bp Feature: domain Description: GIIM Note: maturase Location: 4521 274-4521 502 bp Feature: gene Location: 4522122-4523165 bp Feature: gene Location: 4523174-4541506 bp Ori: ANY24797.1 Feature: domain Description: PRK12467 Location: 4523267-4524257 bp Feature: domain Description: PRK1 2467 Location: 4523267-4524257 bp Feature: domain Description: PRK12467 Location: 4524503-4530761 bp Feature: domain Description: PRK1 2467 Location: 4524503-4530761 bp Feature: domain Description: PRK12467 Location: 4530782-4530995 bp Feature: domain Description: PRK1 2467 Location: 4530782-4530995 bp Feature: domain Description: PRK12467 Location: 4531103-4534226 bp Feature: domain Description: PRK1 2467 Location: 4531 1 03-4534226 bp Feature: domain Description: PRK12467 Location: 4534262-4539758 bp Feature: domain Description: PRK1 2467 Location: 4534262-4539758 bp Feature: domain Description: KOG1178 Location: 4539965-4540577 bp Feature: domain Description: KOG1 1 78 Location: 4539965-4540577 bp Feature: domain Description: EntF Location: 4540709-4541447 bp Feature: domain Description: EntF Location: 4540709-4541 447 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT UvrA (COG0178), DUF772 (pfam05598), DDE_Tnp_1_6 (pfam13751), RVT-Retrons, HGbI_like, pimE (PRK13375), AcrR (COG1309), DUF222 (pfam02720), RVT-GII, GIIM (pfam08388)
PRK12467 (peptide synthase; Provisional), KOG1178 (KOG1178, Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes ), EntF (COG3319)