myRT

myRT report for GCA_001701425.2_ASM170142v2

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Seq: CP027047.1 Klebsiella pneumoniae strain 1_GR_13 plasmid IncR IncN, complete sequence (53495 bp)
Overview 1 RT 1: 50559-53461 bp Neighborhood of RT #1 [50559, 53461] Rep_3 Zn_Tnp_IS1 HTH_Tnp_IS1 RVT-GII Feature: gene Location: 50559-50867 bp Feature: domain Description: Rep_3 Location: 50565-50829 bp Feature: domain Description: Rep_3 Location: 50565-50829 bp Feature: gene Location: 50877-51574 bp Feature: domain Description: Zn_Tnp_IS1 Location: 50883-50985 bp Feature: domain Description: Zn_Tnp_IS1 Location: 50883-50985 bp Feature: domain Description: HTH_Tnp_IS1 Location: 51006-51138 bp Feature: domain Description: HTH_Tnp_IS1 Location: 51 006-51 1 38 bp Feature: gene Location: 51726-53210 bp Ori: AZH96089.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52128-52818 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 521 28-5281 8 bp Feature: gene Location: 53210-53461 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rep_3 (pfam01051), Zn_Tnp_IS1 (pfam03811), HTH_Tnp_IS1 (pfam12759), RVT-GII

Seq: CP027044.1 Klebsiella pneumoniae strain 1_GR_13 plasmid IncFIB IncFII, complete sequence (168873 bp)
Overview 1 RT 1: 145125-149658 bp Neighborhood of RT #1 [145125, 149658] umuC PRK10276 RVT-GII Feature: gene Location: 145125-146396 bp Ori: AZH95818.1 Feature: domain Description: umuC Location: 145128-146391 bp Feature: domain Description: umuC Location: 14512 8-146391 bp Feature: gene Location: 146396-146821 bp Ori: AZH95819.1 Feature: domain Description: PRK10276 Location: 146399-146807 bp Feature: domain Description: PRK102 76 Location: 146399-146807 bp Feature: gene Location: 147228-148712 bp Ori: AZH95820.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 147630-148320 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 147630-14832 0 bp Feature: gene Location: 148945-149175 bp Feature: gene Location: 149437-149658 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: CP027042.1 Klebsiella pneumoniae strain 1_GR_13 chromosome, complete genome (5181675 bp)
Overview 1 RT 1: 660652-663712 bp 2 RT 2: 1845540-1849253 bp 3 RT 3: 3084951-3089050 bp Neighborhood of RT #1 [660652, 663712] DinI HTH_XRE RVT-Retrons Neighborhood of RT #2 [1845540, 1849417] RVT-GII PRK10276 Neighborhood of RT #3 [3084951, 3089061] umuC PRK10276 RVT-GII DinI Feature: gene Location: 660652-661092 bp Ori: AZH91193.1 Feature: domain Description: DinI Location: 660907-661090 bp Feature: domain Description: DinI Location: 660907-661090 bp Feature: gene Location: 661713-662021 bp Ori: AZH91194.1 Feature: domain Description: HTH_XRE Location: 661725-661890 bp Feature: domain Description: HTH_XRE Location: 661725-661890 bp Feature: gene Location: 661999-662949 bp Ori: AZH91195.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 662179-662722 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 662179-662722 bp Feature: gene Location: 663088-663519 bp Feature: gene Location: 663518-663712 bp Feature: gene Location: 1845540-1846376 bp Feature: gene Location: 1847038-1847289 bp Feature: gene Location: 1847289-1848773 bp Ori: AZH92261.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1847691-1848381 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1847691-18483 81 bp Feature: gene Location: 1848850-1849089 bp Feature: gene Location: 1849046-1849417 bp Ori: AZH92263.1 Feature: domain Description: PRK10276 Location: 1849091-1849253 bp Feature: domain Description: PRK10276 Location: 1849091-1849253 bp Feature: gene Location: 3084951-3086216 bp Ori: AZH93431.1 Feature: domain Description: umuC Location: 3084954-3086214 bp Feature: domain Description: umuC Location: 3 084954-3 086214 bp Feature: gene Location: 3086219-3086638 bp Ori: AZH93432.1 Feature: domain Description: PRK10276 Location: 3086222-3086633 bp Feature: domain Description: PRK10276 Location: 3 086222-3 08663 3 bp Feature: gene Location: 3086717-3088201 bp Ori: AZH93433.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3087119-3087809 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 087119-3 087809 bp Feature: gene Location: 3088201-3088452 bp Feature: gene Location: 3088819-3089061 bp Ori: AZH93435.1 Feature: domain Description: DinI Location: 3088870-3089050 bp Feature: domain Description: DinI Location: 3 088870-3 089050 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DinI (pfam06183), HTH_XRE (smart00530), RVT-Retrons, RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)