myRT

myRT report for GCA_001701835.2_ASM170183v2

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Seq: CP027036.1 Klebsiella pneumoniae strain 16_GR_13 chromosome, complete genome (5426917 bp)
Overview 1 RT 1: 2585818-2588281 bp 2 RT 2: 3034571-3039476 bp 3 RT 3: 3369687-3373795 bp 4 RT 4: 4743212-4748790 bp Neighborhood of RT #1 [2585818, 2588281] RVT-GII Neighborhood of RT #2 [3034571, 3039481] Phage_GPA RVT-GII DinI Neighborhood of RT #3 [3369687, 3373797] DinI RVT-GII PRK10276 umuC Neighborhood of RT #4 [4743212, 4748966] AAA_15 RVT-Retrons Nuc_deoxyrib_tr Feature: gene Location: 2585818-2586027 bp Feature: gene Location: 2586228-2586479 bp Feature: gene Location: 2586479-2587963 bp Ori: AZI04376.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2586881-2587571 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2586881 -2587571 bp Feature: gene Location: 2587956-2588033 bp Feature: gene Location: 2588042-2588281 bp Feature: gene Location: 3034571-3036985 bp Ori: AZI04777.1 Feature: domain Description: Phage_GPA Location: 3035135-3036101 bp Feature: domain Description: Phage_GPA Location: 30351 35-30361 01 bp Feature: gene Location: 3037213-3037464 bp Feature: gene Location: 3037464-3038948 bp Ori: AZI04779.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3037866-3038556 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3037866-3038556 bp Feature: gene Location: 3039049-3039237 bp Feature: gene Location: 3039176-3039481 bp Ori: AZI04780.1 Feature: domain Description: DinI Location: 3039290-3039476 bp Feature: domain Description: DinI Location: 3039290-3039476 bp Feature: gene Location: 3369687-3369929 bp Ori: AZI05086.1 Feature: domain Description: DinI Location: 3369738-3369918 bp Feature: domain Description: DinI Location: 3369738-336991 8 bp Feature: gene Location: 3370296-3370547 bp Feature: gene Location: 3370547-3372031 bp Ori: AZI05088.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3370949-3371639 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3370949-3371 639 bp Feature: gene Location: 3372110-3372529 bp Ori: AZI05089.1 Feature: domain Description: PRK10276 Location: 3372113-3372524 bp Feature: domain Description: PRK1 0276 Location: 33721 1 3-3372524 bp Feature: gene Location: 3372532-3373797 bp Ori: AZI05090.1 Feature: domain Description: umuC Location: 3372535-3373795 bp Feature: domain Description: umuC Location: 3372535-3373795 bp Feature: gene Location: 4743212-4743442 bp Feature: gene Location: 4744325-4746601 bp Ori: AZI06377.1 Feature: domain Description: AAA_15 Location: 4744358-4745366 bp Feature: domain Description: AAA_1 5 Location: 4744358-4745366 bp Feature: gene Location: 4746716-4747816 bp Ori: AZI06378.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4746899-4747427 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4746899-4747427 bp Feature: gene Location: 4748297-4748452 bp Feature: gene Location: 4748472-4748966 bp Ori: AZI07145.1 Feature: domain Description: Nuc_deoxyrib_tr Location: 4748616-4748790 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 474861 6-4748790 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Phage_GPA (pfam05840), DinI (pfam06183), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), AAA_15 (pfam13175), RVT-Retrons, Nuc_deoxyrib_tr (pfam05014)

Seq: CP027037.1 Klebsiella pneumoniae strain 16_GR_13 plasmid IncFIB IncFII, complete sequence (187670 bp)
Overview 1 RT 1: 164461-167577 bp Neighborhood of RT #1 [164461, 167577] PRK10276 RVT-GII Feature: gene Location: 164461-164886 bp Ori: AZI07314.1 Feature: domain Description: PRK10276 Location: 164464-164872 bp Feature: domain Description: PRK102 76 Location: 164464-164872 bp Feature: gene Location: 165041-165292 bp Feature: gene Location: 165292-166776 bp Ori: AZI07316.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 165694-166384 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 165694-166384 bp Feature: gene Location: 167010-167240 bp Feature: gene Location: 167299-167577 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII