myRT

myRT report for GCA_001702045.2_ASM170204v2

Download annotations/find similar RTs

Seq: CP027053.1 Klebsiella pneumoniae strain 2_GR_12 chromosome, complete genome (5466424 bp)
Overview 1 RT 1: 431934-436805 bp 2 RT 2: 1767804-1771941 bp 3 RT 3: 1948164-1952262 bp 4 RT 4: 2291894-2296731 bp 5 RT 5: 2736643-2739423 bp Neighborhood of RT #1 [431934, 436819] dacD RVT-GII PRK10016 YccC Neighborhood of RT #2 [1767804, 1771941] umuC PRK10276 RVT-GII Neighborhood of RT #3 [1948164, 1952273] umuC PRK10276 RVT-GII DinI Neighborhood of RT #4 [2291894, 2296781] Phage_CI_repr Phage_CI_repr Phage_CI_C RVT-GII int Neighborhood of RT #5 [2736643, 2739423] PRK10276 PRK10276 RVT-GII Feature: gene Location: 431934-433103 bp Ori: AZH96453.1 Feature: domain Description: dacD Location: 431943-433098 bp Feature: domain Description: dacD Location: 431 943-433098 bp Feature: gene Location: 433373-433624 bp Feature: gene Location: 433624-435108 bp Ori: AZH96455.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 434026-434716 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 434026-43471 6 bp Feature: gene Location: 435189-435662 bp Ori: AZH96456.1 Feature: domain Description: PRK10016 Location: 435192-435651 bp Feature: domain Description: PRK1 001 6 Location: 4351 92-435651 bp Feature: gene Location: 435761-436819 bp Ori: AZH96457.1 Feature: domain Description: YccC Location: 435767-436805 bp Feature: domain Description: YccC Location: 435767-436805 bp Feature: gene Location: 1767804-1769069 bp Ori: AZH97722.1 Feature: domain Description: umuC Location: 1767807-1769067 bp Feature: domain Description: umuC Location: 1 767807-1 769067 bp Feature: gene Location: 1769071-1769490 bp Ori: AZH97723.1 Feature: domain Description: PRK10276 Location: 1769074-1769485 bp Feature: domain Description: PRK1 0276 Location: 1 769074-1 769485 bp Feature: gene Location: 1769570-1771053 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1769972-1770662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 769972-1 770662 bp Feature: gene Location: 1771053-1771304 bp Feature: gene Location: 1771852-1771941 bp Feature: gene Location: 1948164-1949429 bp Ori: AZH97901.1 Feature: domain Description: umuC Location: 1948167-1949427 bp Feature: domain Description: umuC Location: 1 9481 67-1 949427 bp Feature: gene Location: 1949432-1949851 bp Ori: AZH97902.1 Feature: domain Description: PRK10276 Location: 1949435-1949846 bp Feature: domain Description: PRK1 0276 Location: 1 949435-1 949846 bp Feature: gene Location: 1949930-1951413 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1950332-1951022 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 950332-1 951 022 bp Feature: gene Location: 1951413-1951664 bp Feature: gene Location: 1952031-1952273 bp Ori: AZH97904.1 Feature: domain Description: DinI Location: 1952082-1952262 bp Feature: domain Description: DinI Location: 1 952082-1 952262 bp Feature: gene Location: 2291894-2292772 bp Ori: AZH98222.1 Feature: domain Description: Phage_CI_repr Location: 2291921-2292104 bp Feature: domain Description: Phage_CI_repr Location: 2291 921 -22921 04 bp Feature: domain Description: Phage_CI_repr Location: 2292233-2292425 bp Feature: domain Description: Phage_CI_repr Location: 2292233-2292425 bp Feature: domain Description: Phage_CI_C Location: 2292452-2292746 bp Feature: domain Description: Phage_CI_C Location: 2292452-2292746 bp Feature: gene Location: 2292784-2293728 bp Feature: gene Location: 2293827-2295310 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2294229-2294919 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2294229-229491 9 bp Feature: gene Location: 2295310-2295561 bp Feature: gene Location: 2295729-2296781 bp Ori: AZH98225.1 Feature: domain Description: int Location: 2295732-2296731 bp Feature: domain Description: int Location: 2295732-2296731 bp Feature: gene Location: 2736643-2736960 bp Ori: AZH98608.1 Feature: domain Description: PRK10276 Location: 2736649-2736763 bp Feature: domain Description: PRK1 0276 Location: 2736649-2736763 bp Feature: domain Description: PRK10276 Location: 2736790-2736859 bp Feature: domain Description: PRK1 0276 Location: 2736790-2736859 bp Feature: gene Location: 2736960-2737199 bp Feature: gene Location: 2737277-2738761 bp Ori: AZH98610.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2737679-2738369 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2737679-2738369 bp Feature: gene Location: 2738761-2739012 bp Feature: gene Location: 2739214-2739423 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dacD (PRK11397), RVT-GII, PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289), umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), DinI (pfam06183), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452), int (PHA02601)

Seq: CP027054.1 Klebsiella pneumoniae strain 2_GR_12 plasmid IncFIB IncFII (197872 bp)
Overview 1 RT 1: 119895-123157 bp Neighborhood of RT #1 [119895, 123157] PRK10276 RVT-GII Feature: gene Location: 119895-120320 bp Ori: AZI01488.1 Feature: domain Description: PRK10276 Location: 119898-120306 bp Feature: domain Description: PRK102 76 Location: 119898-12 0306 bp Feature: gene Location: 120475-120726 bp Feature: gene Location: 120726-122210 bp Ori: AZI01490.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 121128-121818 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 112 8-12 1818 bp Feature: gene Location: 122444-122674 bp Feature: gene Location: 122936-123157 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII