myRT

myRT report for GCA_001704235.1_ASM170423v1

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Seq: CP016811.1 Klebsiella pneumoniae strain DHQP1002001 chromosome, complete genome (5184828 bp)
Overview 1 RT 1: 1292340-1296837 bp 2 RT 2: 3743032-3747281 bp Neighborhood of RT #1 [1292340, 1296837] Acetyltransf_10 PHA02517 RVT-GII GIIM InsE Neighborhood of RT #2 [3743032, 3747814] lpfA InsE RVT-GII GIIM PHA02517 DDE_Tnp_1_5 Feature: gene Location: 1292340-1292795 bp Ori: AOA95327.1 Feature: domain Description: Acetyltransf_10 Location: 1292430-1292745 bp Feature: domain Description: Acetyltransf_1 0 Location: 1 292430-1 292745 bp Feature: gene Location: 1292797-1293273 bp Feature: domain Description: PHA02517 Location: 1292800-1293265 bp Feature: domain Description: PHA0251 7 Location: 1 292800-1 293265 bp Feature: gene Location: 1293354-1294862 bp Ori: AOA98951.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1293612-1294344 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 29361 2-1 294344 bp Feature: domain Description: GIIM Note: maturase Location: 1294419-1294617 bp Feature: domain Description: GIIM Note: maturase Location: 1 29441 9-1 29461 7 bp Feature: gene Location: 1295936-1296214 bp Ori: AOA95328.1 Feature: domain Description: InsE Location: 1295948-1296206 bp Feature: domain Description: InsE Location: 1 295948-1 296206 bp Feature: gene Location: 1296278-1296837 bp Feature: gene Location: 3743032-3743373 bp Feature: domain Description: lpfA Location: 3743047-3743356 bp Feature: domain Description: lpfA Location: 3743047-3743356 bp Feature: gene Location: 3743423-3743701 bp Ori: AOA97569.1 Feature: domain Description: InsE Location: 3743435-3743693 bp Feature: domain Description: InsE Location: 3743435-3743693 bp Feature: gene Location: 3744775-3746283 bp Ori: AOA99068.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3745033-3745765 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3745033-3745765 bp Feature: domain Description: GIIM Note: maturase Location: 3745840-3746038 bp Feature: domain Description: GIIM Note: maturase Location: 3745840-3746038 bp Feature: gene Location: 3746364-3746849 bp Feature: domain Description: PHA02517 Location: 3746367-3746832 bp Feature: domain Description: PHA0251 7 Location: 3746367-3746832 bp Feature: gene Location: 3746891-3747814 bp Ori: AOA97570.1 Feature: domain Description: DDE_Tnp_1_5 Location: 3746948-3747281 bp Feature: domain Description: DDE_Tnp_1 _5 Location: 3746948-3747281 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Acetyltransf_10 (pfam13673), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963), lpfA (PRK15289), DDE_Tnp_1_5 (pfam13737)

Seq: CP016810.1 Klebsiella pneumoniae strain DHQP1002001 plasmid p_IncFIB_DHQP1002001, complete sequence (307743 bp)
Overview 1 RT 1: 85408-90534 bp 2 RT 2: 238449-243462 bp Neighborhood of RT #1 [85408, 90545] Phage_integrase COG3547 RVT-GII GIIM InsE Neighborhood of RT #2 [238449, 243467] Antirestrict RVT-GII PRK10276 umuC Feature: gene Location: 85408-85758 bp Feature: domain Description: Phage_integrase Location: 85414-85645 bp Feature: domain Description: Phage_integrase Location: 85414-85645 bp Feature: gene Location: 86058-87134 bp Ori: AOA93938.1 Feature: domain Description: COG3547 Location: 86097-87018 bp Feature: domain Description: COG3547 Location: 86097-87018 bp Feature: gene Location: 87676-89184 bp Ori: AOA94159.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87934-88666 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87934-88666 bp Feature: domain Description: GIIM Note: maturase Location: 88741-88939 bp Feature: domain Description: GIIM Note: maturase Location: 88741-88939 bp Feature: gene Location: 89830-90123 bp Feature: gene Location: 90243-90545 bp Ori: AOA93940.1 Feature: domain Description: InsE Location: 90252-90534 bp Feature: domain Description: InsE Location: 902 52 -90534 bp Feature: gene Location: 238449-238874 bp Ori: AOA94089.1 Feature: domain Description: Antirestrict Location: 238584-238872 bp Feature: domain Description: Antirestrict Location: 2 38584-2 38872 bp Feature: gene Location: 239394-239624 bp Feature: gene Location: 239858-241366 bp Ori: AOA94090.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 240260-240974 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 402 60-2 40974 bp Feature: gene Location: 241771-242196 bp Ori: AOA94091.1 Feature: domain Description: PRK10276 Location: 241774-242182 bp Feature: domain Description: PRK102 76 Location: 2 41774-2 42 182 bp Feature: gene Location: 242196-243467 bp Ori: AOA94092.1 Feature: domain Description: umuC Location: 242199-243462 bp Feature: domain Description: umuC Location: 2 42 199-2 43462 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_integrase (pfam00589), COG3547 (Transposase ), RVT-GII, GIIM (pfam08388), InsE (COG2963), Antirestrict (pfam03230), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: CP016812.1 Klebsiella pneumoniae strain DHQP1002001 plasmid p_incR_DHQP1002001, complete sequence (65887 bp)
Overview 1 RT 1: 3059-8081 bp Neighborhood of RT #1 [3059, 8089] ArdC RVT-GII PRK10276 umuC Feature: gene Location: 3059-4024 bp Ori: AOA99127.1 Feature: domain Description: ArdC Location: 3185-4019 bp Feature: domain Description: ArdC Location: 3 185-4019 bp Feature: gene Location: 4232-4501 bp Feature: gene Location: 4494-5978 bp Ori: AOA99129.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4896-5586 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4896-5586 bp Feature: gene Location: 6387-6818 bp Ori: AOA99130.1 Feature: domain Description: PRK10276 Location: 6438-6801 bp Feature: domain Description: PRK10276 Location: 643 8-6801 bp Feature: gene Location: 6818-8089 bp Ori: AOA99131.1 Feature: domain Description: umuC Location: 6821-8081 bp Feature: domain Description: umuC Location: 6821-8081 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArdC (COG4227), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)