myRT

myRT report for GCA_001704275.1_ASM170427v1

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Seq: CP011533.1 Streptomyces noursei ATCC 11455, complete genome (9815884 bp)
Overview 1 RT 1: 29842-39884 bp 2 RT 2: 9392446-9399803 bp 3 RT 3: 9405944-9410450 bp 4 RT 4: 9776001-9785288 bp Neighborhood of RT #1 [29842, 39884] COG4584 PRK06526 RVT-GII Intron_maturas2 HNHc Neighborhood of RT #2 [9392446, 9400216] DLH PHA02517 RVT-GII GIIM RVT-GII GIIM InsE Nterm_IS4 DDE_Tnp_1 Neighborhood of RT #3 [9405944, 9410473] DDE_Tnp_1_2 GIIM RVT-GII DDE_Tnp_ISAZ013 HTH_Tnp_4 HTH_Tnp_4 DDE_Tnp_4 Neighborhood of RT #4 [9776001, 9786043] RVT-GII Intron_maturas2 HNHc PRK06526 COG4584 Feature: gene Location: 29842-31473 bp Ori: ANZ13356.1 Feature: domain Description: COG4584 Location: 29860-30718 bp Feature: domain Description: COG4584 Location: 29860-3071 8 bp Feature: gene Location: 31470-32240 bp Ori: ANZ13357.1 Feature: domain Description: PRK06526 Location: 31530-32121 bp Feature: domain Description: PRK06526 Location: 31 530-321 21 bp Feature: gene Location: 32226-34013 bp Ori: ANZ13358.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32487-33282 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32487-33282 bp Feature: domain Description: Intron_maturas2 Location: 33399-33609 bp Feature: domain Description: Intron_maturas2 Location: 33399-33609 bp Feature: domain Description: HNHc Note: nucleases Location: 33786-33969 bp Feature: domain Description: HNHc Note: nucleases Location: 33786-33969 bp Feature: gene Location: 34916-38518 bp Feature: gene Location: 39156-39884 bp Feature: gene Location: 9392446-9393174 bp Ori: ANZ21562.1 Feature: domain Description: DLH Location: 9392515-9393085 bp Feature: domain Description: DLH Location: 939251 5-9393085 bp Feature: gene Location: 9393633-9394532 bp Ori: ANZ21563.1 Feature: domain Description: PHA02517 Location: 9393702-9394497 bp Feature: domain Description: PHA0251 7 Location: 9393702-9394497 bp Feature: gene Location: 9394631-9395896 bp Ori: ANZ21564.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9394847-9395507 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9394847-9395507 bp Feature: domain Description: GIIM Note: maturase Location: 9395585-9395807 bp Feature: domain Description: GIIM Note: maturase Location: 9395585-9395807 bp Feature: gene Location: 9396450-9397706 bp Ori: ANZ21565.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9396666-9397329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9396666-9397329 bp Feature: domain Description: GIIM Note: maturase Location: 9397410-9397641 bp Feature: domain Description: GIIM Note: maturase Location: 939741 0-9397641 bp Feature: gene Location: 9398377-9398697 bp Ori: ANZ21566.1 Feature: domain Description: InsE Location: 9398380-9398680 bp Feature: domain Description: InsE Location: 9398380-9398680 bp Feature: gene Location: 9398996-9400216 bp Ori: ANZ21567.1 Feature: domain Description: Nterm_IS4 Location: 9398999-9399167 bp Feature: domain Description: Nterm_IS4 Location: 9398999-93991 67 bp Feature: domain Description: DDE_Tnp_1 Location: 9399221-9399803 bp Feature: domain Description: DDE_Tnp_1 Location: 9399221 -9399803 bp Feature: gene Location: 9405944-9406114 bp Ori: ANZ21575.1 Feature: domain Description: DDE_Tnp_1_2 Location: 9406007-9406100 bp Feature: domain Description: DDE_Tnp_1 _2 Location: 9406007-94061 00 bp Feature: gene Location: 9406512-9406889 bp Ori: ANZ21576.1 Feature: domain Description: GIIM Note: maturase Location: 9406551-9406767 bp Feature: domain Description: GIIM Note: maturase Location: 9406551 -9406767 bp Feature: gene Location: 9406886-9409075 bp Ori: ANZ21577.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9406946-9407282 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9406946-9407282 bp Feature: domain Description: DDE_Tnp_ISAZ013 Location: 9407672-9408590 bp Feature: domain Description: DDE_Tnp_ISAZ01 3 Location: 9407672-9408590 bp Feature: domain Description: HTH_Tnp_4 Location: 9408821-9408965 bp Feature: domain Description: HTH_Tnp_4 Location: 9408821 -9408965 bp Feature: gene Location: 9409324-9409701 bp Feature: gene Location: 9409709-9410473 bp Ori: ANZ21579.1 Feature: domain Description: HTH_Tnp_4 Location: 9409811-9409952 bp Feature: domain Description: HTH_Tnp_4 Location: 940981 1 -9409952 bp Feature: domain Description: DDE_Tnp_4 Location: 9410015-9410450 bp Feature: domain Description: DDE_Tnp_4 Location: 941 001 5-941 0450 bp Feature: gene Location: 9776001-9776729 bp Feature: gene Location: 9777367-9780969 bp Feature: gene Location: 9781872-9783659 bp Ori: ANZ21974.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9782133-9782928 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 97821 33-9782928 bp Feature: domain Description: Intron_maturas2 Location: 9783045-9783255 bp Feature: domain Description: Intron_maturas2 Location: 9783045-9783255 bp Feature: domain Description: HNHc Note: nucleases Location: 9783432-9783615 bp Feature: domain Description: HNHc Note: nucleases Location: 9783432-978361 5 bp Feature: gene Location: 9783645-9784415 bp Ori: ANZ21975.1 Feature: domain Description: PRK06526 Location: 9783705-9784296 bp Feature: domain Description: PRK06526 Location: 9783705-9784296 bp Feature: gene Location: 9784412-9786043 bp Ori: ANZ21976.1 Feature: domain Description: COG4584 Location: 9784430-9785288 bp Feature: domain Description: COG4584 Location: 9784430-9785288 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4584 (Transposase ), PRK06526 (transposase; Provisional), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), DLH (pfam01738), PHA02517 (putative transposase OrfB; Reviewed), GIIM (pfam08388), InsE (COG2963), Nterm_IS4 (pfam13006)
DDE_Tnp_1 (pfam01609), DDE_Tnp_1_2 (pfam13586), DDE_Tnp_ISAZ013 (pfam07592), HTH_Tnp_4 (pfam13613), DDE_Tnp_4 (pfam13359)