myRT

myRT report for GCA_001705385.1_ASM170538v1

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Seq: CP015822.1 Klebsiella pneumoniae isolate blood sample 2 chromosome, complete genome (5452045 bp)
Overview 1 RT 1: 271940-277358 bp 2 RT 2: 457768-463633 bp 3 RT 3: 1702023-1708506 bp 4 RT 4: 4927894-4931301 bp 5 RT 5: 5369240-5374788 bp Neighborhood of RT #1 [271940, 277360] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #2 [457768, 463635] Rve PinE RVT-GII PRK10276 umuC Neighborhood of RT #3 [1702023, 1708508] YccC PRK10016 RVT-GII dacD SbcB Neighborhood of RT #4 [4927894, 4931402] Laminin_G_3 RVT-GII PRK10276 PRK10276 Neighborhood of RT #5 [5369240, 5374814] YbjK int RVT-GII Phage_CI_repr Phage_CI_repr Phage_CI_C Feature: gene Location: 271940-273079 bp Ori: AOD02710.1 Feature: domain Description: GT9_LPS_heptosyltransferase Location: 272123-273023 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 2721 23-273023 bp Feature: gene Location: 273250-273492 bp Ori: AOD02711.1 Feature: domain Description: DinI Location: 273301-273481 bp Feature: domain Description: DinI Location: 273301 -273481 bp Feature: gene Location: 274110-275594 bp Ori: AOD02712.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 274512-275202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27451 2-275202 bp Feature: gene Location: 275673-276092 bp Ori: AOD02713.1 Feature: domain Description: PRK10276 Location: 275676-276087 bp Feature: domain Description: PRK1 0276 Location: 275676-276087 bp Feature: gene Location: 276095-277360 bp Ori: AOD02714.1 Feature: domain Description: umuC Location: 276098-277358 bp Feature: domain Description: umuC Location: 276098-277358 bp Feature: gene Location: 457768-458472 bp Ori: AOD02895.1 Feature: domain Description: Rve Location: 457771-458416 bp Feature: domain Description: Rve Location: 457771 -45841 6 bp Feature: gene Location: 458478-458987 bp Ori: AOD02896.1 Feature: domain Description: PinE Location: 458526-458979 bp Feature: domain Description: PinE Location: 458526-458979 bp Feature: gene Location: 460385-461869 bp Ori: AOD02897.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 460787-461477 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 460787-461 477 bp Feature: gene Location: 461949-462368 bp Ori: AOD07646.1 Feature: domain Description: PRK10276 Location: 461952-462363 bp Feature: domain Description: PRK1 0276 Location: 461 952-462363 bp Feature: gene Location: 462370-463635 bp Ori: AOD02898.1 Feature: domain Description: umuC Location: 462373-463633 bp Feature: domain Description: umuC Location: 462373-463633 bp Feature: gene Location: 1702023-1703081 bp Ori: AOD04098.1 Feature: domain Description: YccC Location: 1702029-1703067 bp Feature: domain Description: YccC Location: 1 702029-1 703067 bp Feature: gene Location: 1703180-1703653 bp Ori: AOD04099.1 Feature: domain Description: PRK10016 Location: 1703183-1703642 bp Feature: domain Description: PRK1 001 6 Location: 1 7031 83-1 703642 bp Feature: gene Location: 1703735-1705219 bp Ori: AOD04100.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1704137-1704827 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 7041 37-1 704827 bp Feature: gene Location: 1705740-1706903 bp Ori: AOD07704.1 Feature: domain Description: dacD Location: 1705743-1706898 bp Feature: domain Description: dacD Location: 1 705743-1 706898 bp Feature: gene Location: 1707084-1708508 bp Ori: AOD04101.1 Feature: domain Description: SbcB Location: 1707090-1708506 bp Feature: domain Description: SbcB Location: 1 707090-1 708506 bp Feature: gene Location: 4927894-4928625 bp Ori: AOD07146.1 Feature: domain Description: Laminin_G_3 Location: 4928215-4928569 bp Feature: domain Description: Laminin_G_3 Location: 492821 5-4928569 bp Feature: gene Location: 4928622-4928831 bp Feature: gene Location: 4929284-4930768 bp Ori: AOD07148.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4929686-4930376 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4929686-4930376 bp Feature: gene Location: 4930846-4931085 bp Feature: gene Location: 4931085-4931402 bp Ori: AOD07150.1 Feature: domain Description: PRK10276 Location: 4931091-4931205 bp Feature: domain Description: PRK1 0276 Location: 4931 091 -4931 205 bp Feature: domain Description: PRK10276 Location: 4931232-4931301 bp Feature: domain Description: PRK1 0276 Location: 4931 232-4931 301 bp Feature: gene Location: 5369240-5369803 bp Ori: AOD07546.1 Feature: domain Description: YbjK Location: 5369246-5369783 bp Feature: domain Description: YbjK Location: 5369246-5369783 bp Feature: gene Location: 5369926-5370978 bp Ori: AOD07547.1 Feature: domain Description: int Location: 5369929-5370928 bp Feature: domain Description: int Location: 5369929-5370928 bp Feature: gene Location: 5371397-5372881 bp Ori: AOD07548.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5371799-5372489 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5371 799-5372489 bp Feature: gene Location: 5372980-5373924 bp Feature: gene Location: 5373936-5374814 bp Ori: AOD07550.1 Feature: domain Description: Phage_CI_repr Location: 5373963-5374146 bp Feature: domain Description: Phage_CI_repr Location: 5373963-53741 46 bp Feature: domain Description: Phage_CI_repr Location: 5374275-5374467 bp Feature: domain Description: Phage_CI_repr Location: 5374275-5374467 bp Feature: domain Description: Phage_CI_C Location: 5374494-5374788 bp Feature: domain Description: Phage_CI_C Location: 5374494-5374788 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), Rve (COG3316), PinE (COG1961), YccC (COG1289), PRK10016 (DNA gyrase inhibitor SbmC), dacD (PRK11397)
SbcB (COG2925), Laminin_G_3 (pfam13385), YbjK (COG3226), int (PHA02601), Phage_CI_repr (pfam07022), Phage_CI_C (pfam16452)

Seq: CP015823.1 Klebsiella pneumoniae isolate blood sample 2 plasmid 1, complete sequence (205221 bp)
Overview 1 RT 1: 185114-190105 bp Neighborhood of RT #1 [185114, 190110] Antirestrict RVT-GII PRK10276 umuC Feature: gene Location: 185114-185539 bp Ori: AOD08014.1 Feature: domain Description: Antirestrict Location: 185249-185537 bp Feature: domain Description: Antirestrict Location: 1852 49-185537 bp Feature: gene Location: 186060-186290 bp Feature: gene Location: 186524-188008 bp Ori: AOD08016.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 186926-187616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18692 6-187616 bp Feature: gene Location: 188414-188839 bp Ori: AOD08017.1 Feature: domain Description: PRK10276 Location: 188417-188825 bp Feature: domain Description: PRK102 76 Location: 188417-18882 5 bp Feature: gene Location: 188839-190110 bp Ori: AOD08018.1 Feature: domain Description: umuC Location: 188842-190105 bp Feature: domain Description: umuC Location: 188842 -190105 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Antirestrict (pfam03230), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)