myRT

myRT report for GCA_001708225.1_ASM170822v1

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Seq: CP016814.1 Klebsiella pneumoniae strain ED23 chromosome, complete genome (5374626 bp)
Overview 1 RT 1: 598079-603554 bp 2 RT 2: 3487855-3495507 bp 3 RT 3: 3839698-3842610 bp Neighborhood of RT #1 [598079, 603568] HTH_XRE HTH_XRE RVT-UG2 traC_PFL_4706 conj_conj_conj_TIGR03751 Neighborhood of RT #2 [3487855, 3495507] DUF4917 AAA_15 RVT-Retrons Neighborhood of RT #3 [3839698, 3842663] PRK10276 RVT-GII Lipase_GDSL_2 Feature: gene Location: 598079-598309 bp Ori: AOE29526.1 Feature: domain Description: HTH_XRE Location: 598121-598289 bp Feature: domain Description: HTH_XRE Location: 5981 21 -598289 bp Feature: gene Location: 598392-598619 bp Ori: AOE29527.1 Feature: domain Description: HTH_XRE Location: 598434-598596 bp Feature: domain Description: HTH_XRE Location: 598434-598596 bp Feature: gene Location: 598817-600094 bp Ori: AOE29528.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 599015-599801 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 59901 5-599801 bp Feature: gene Location: 600582-603212 bp Ori: AOE29529.1 Feature: domain Description: traC_PFL_4706 Location: 600621-603201 bp Feature: domain Description: traC_PFL_4706 Location: 600621 -603201 bp Feature: gene Location: 603209-603568 bp Ori: AOE29530.1 Feature: domain Description: conj_conj_conj_TIGR03751 Location: 603227-603554 bp Feature: domain Description: conj_conj_conj_TIGR03751 Location: 603227-603554 bp Feature: gene Location: 3487855-3488874 bp Ori: AOE32152.1 Feature: domain Description: DUF4917 Location: 3487915-3488839 bp Feature: domain Description: DUF491 7 Location: 348791 5-3488839 bp Feature: gene Location: 3490273-3492519 bp Ori: AOE32153.1 Feature: domain Description: AAA_15 Location: 3490276-3491284 bp Feature: domain Description: AAA_1 5 Location: 3490276-3491 284 bp Feature: gene Location: 3492634-3493734 bp Ori: AOE32154.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3492814-3493348 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 349281 4-3493348 bp Feature: gene Location: 3494390-3495258 bp Feature: gene Location: 3495265-3495507 bp Feature: gene Location: 3839698-3840015 bp Ori: AOE32439.1 Feature: domain Description: PRK10276 Location: 3839704-3839818 bp Feature: domain Description: PRK1 0276 Location: 3839704-383981 8 bp Feature: gene Location: 3840015-3840254 bp Feature: gene Location: 3840332-3841817 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3840734-3841424 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3840734-3841 424 bp Feature: gene Location: 3842238-3842663 bp Ori: AOE32441.1 Feature: domain Description: Lipase_GDSL_2 Location: 3842268-3842610 bp Feature: domain Description: Lipase_GDSL_2 Location: 3842268-384261 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-UG2, traC_PFL_4706 (TIGR03744), conj_conj_conj_TIGR03751, DUF4917 (pfam16263), AAA_15 (pfam13175), RVT-Retrons, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, Lipase_GDSL_2 (pfam13472)