myRT

myRT report for GCA_001708245.1_ASM170824v1

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Seq: CP016813.1 Klebsiella pneumoniae strain ED2 chromosome, complete genome (5412960 bp)
Overview 1 RT 1: 598072-603547 bp 2 RT 2: 2098289-2105940 bp 3 RT 3: 3578139-3583502 bp 4 RT 4: 3653269-3659086 bp Neighborhood of RT #1 [598072, 603561] HTH_XRE HTH_XRE RVT-UG2 traC_PFL_4706 conj_conj_conj_TIGR03751 Neighborhood of RT #2 [2098289, 2105954] FhlA EAL YncE YncE RVT-GII PRK10016 YccC Neighborhood of RT #3 [3578139, 3583558] umuC PRK10276 RVT-GII DinI GT9_LPS_heptosyltransferase Neighborhood of RT #4 [3653269, 3659088] LexA_DNA_bind PRK10597 RVT-GII dacD SbcB Feature: gene Location: 598072-598302 bp Ori: AOE24450.1 Feature: domain Description: HTH_XRE Location: 598114-598282 bp Feature: domain Description: HTH_XRE Location: 5981 1 4-598282 bp Feature: gene Location: 598385-598612 bp Ori: AOE24451.1 Feature: domain Description: HTH_XRE Location: 598427-598589 bp Feature: domain Description: HTH_XRE Location: 598427-598589 bp Feature: gene Location: 598810-600087 bp Ori: AOE24452.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 599008-599794 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 599008-599794 bp Feature: gene Location: 600575-603205 bp Ori: AOE24453.1 Feature: domain Description: traC_PFL_4706 Location: 600614-603194 bp Feature: domain Description: traC_PFL_4706 Location: 60061 4-6031 94 bp Feature: gene Location: 603202-603561 bp Ori: AOE24454.1 Feature: domain Description: conj_conj_conj_TIGR03751 Location: 603220-603547 bp Feature: domain Description: conj_conj_conj_TIGR03751 Location: 603220-603547 bp Feature: gene Location: 2098289-2100052 bp Ori: AOE25784.1 Feature: domain Description: FhlA Location: 2098358-2098751 bp Feature: domain Description: FhlA Location: 2098358-2098751 bp Feature: domain Description: EAL Location: 2099294-2100008 bp Feature: domain Description: EAL Location: 2099294-21 00008 bp Feature: gene Location: 2100396-2101757 bp Ori: AOE25785.1 Feature: domain Description: YncE Location: 2100804-2101212 bp Feature: domain Description: YncE Location: 21 00804-21 01 21 2 bp Feature: domain Description: YncE Location: 2101281-2101701 bp Feature: domain Description: YncE Location: 21 01 281 -21 01 701 bp Feature: gene Location: 2102758-2104242 bp Ori: AOE25786.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2103160-2103850 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21 031 60-21 03850 bp Feature: gene Location: 2104324-2104797 bp Ori: AOE25787.1 Feature: domain Description: PRK10016 Location: 2104327-2104786 bp Feature: domain Description: PRK1 001 6 Location: 21 04327-21 04786 bp Feature: gene Location: 2104896-2105954 bp Ori: AOE25788.1 Feature: domain Description: YccC Location: 2104902-2105940 bp Feature: domain Description: YccC Location: 21 04902-21 05940 bp Feature: gene Location: 3578139-3579404 bp Ori: AOE27100.1 Feature: domain Description: umuC Location: 3578142-3579402 bp Feature: domain Description: umuC Location: 35781 42-3579402 bp Feature: gene Location: 3579407-3579826 bp Ori: AOE27101.1 Feature: domain Description: PRK10276 Location: 3579410-3579821 bp Feature: domain Description: PRK1 0276 Location: 357941 0-3579821 bp Feature: gene Location: 3579905-3581389 bp Ori: AOE27102.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3580307-3580997 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3580307-3580997 bp Feature: gene Location: 3582006-3582248 bp Ori: AOE27103.1 Feature: domain Description: DinI Location: 3582057-3582237 bp Feature: domain Description: DinI Location: 3582057-3582237 bp Feature: gene Location: 3582419-3583558 bp Ori: AOE27104.1 Feature: domain Description: GT9_LPS_heptosyltransferase Location: 3582602-3583502 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 3582602-3583502 bp Feature: gene Location: 3653269-3653598 bp Ori: AOE28940.1 Feature: domain Description: LexA_DNA_bind Location: 3653284-3653473 bp Feature: domain Description: LexA_DNA_bind Location: 3653284-3653473 bp Feature: gene Location: 3654004-3654237 bp Ori: AOE27173.1 Feature: domain Description: PRK10597 Location: 3654007-3654232 bp Feature: domain Description: PRK1 0597 Location: 3654007-3654232 bp Feature: gene Location: 3654316-3655800 bp Ori: AOE27174.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3654718-3655408 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 365471 8-3655408 bp Feature: gene Location: 3656320-3657483 bp Ori: AOE28941.1 Feature: domain Description: dacD Location: 3656323-3657478 bp Feature: domain Description: dacD Location: 3656323-3657478 bp Feature: gene Location: 3657664-3659088 bp Ori: AOE27175.1 Feature: domain Description: SbcB Location: 3657670-3659086 bp Feature: domain Description: SbcB Location: 3657670-3659086 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-UG2, traC_PFL_4706 (TIGR03744), conj_conj_conj_TIGR03751, FhlA (COG3604), EAL (smart00052), YncE (COG3391), RVT-GII, PRK10016 (DNA gyrase inhibitor SbmC), YccC (COG1289)
umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), DinI (pfam06183), GT9_LPS_heptosyltransferase (cd03789), LexA_DNA_bind (pfam01726), PRK10597 (DNA damage-inducible protein I; Provisional), dacD (PRK11397), SbcB (COG2925)