myRT

myRT report for GCA_001712835.1_ASM171283v1

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Seq: CP012503.1 Streptococcus agalactiae strain NGBS357, complete genome (2172875 bp)
Overview 1 RT 1: 621721-628136 bp 2 RT 2: 1761438-1765647 bp Neighborhood of RT #1 [621721, 628136] VirD4 SSB_OBF RVT-GII HNHc Neighborhood of RT #2 [1761438, 1765649] EcCorA_ZntB-like_u2 rpsR RVT-GII GIIM PRK07275 rpsF Feature: gene Location: 621721-623505 bp Ori: AOF50632.1 Feature: domain Description: VirD4 Location: 621952-623398 bp Feature: domain Description: VirD4 Location: 621 952-623398 bp Feature: gene Location: 623671-623982 bp Ori: AOF50633.1 Feature: domain Description: SSB_OBF Location: 623725-623941 bp Feature: domain Description: SSB_OBF Location: 623725-623941 bp Feature: gene Location: 624845-626722 bp Ori: AOF52072.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 625172-625910 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6251 72-62591 0 bp Feature: domain Description: HNHc Note: nucleases Location: 626456-626606 bp Feature: domain Description: HNHc Note: nucleases Location: 626456-626606 bp Feature: gene Location: 626992-627855 bp Feature: gene Location: 627873-628136 bp Feature: gene Location: 1761438-1762382 bp Ori: AOF51665.1 Feature: domain Description: EcCorA_ZntB-like_u2 Location: 1761507-1762380 bp Feature: domain Description: EcCorA_ZntB-like_u2 Location: 1 761 507-1 762380 bp Feature: gene Location: 1762552-1762791 bp Ori: AOF51666.1 Feature: domain Description: rpsR Location: 1762561-1762786 bp Feature: domain Description: rpsR Location: 1 762561 -1 762786 bp Feature: gene Location: 1762959-1764278 bp Ori: AOF51667.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1763259-1763892 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 763259-1 763892 bp Feature: domain Description: GIIM Note: maturase Location: 1763961-1764183 bp Feature: domain Description: GIIM Note: maturase Location: 1 763961 -1 7641 83 bp Feature: gene Location: 1764859-1765350 bp Ori: AOF51668.1 Feature: domain Description: PRK07275 Location: 1764862-1765348 bp Feature: domain Description: PRK07275 Location: 1 764862-1 765348 bp Feature: gene Location: 1765362-1765649 bp Ori: AOF51669.1 Feature: domain Description: rpsF Location: 1765365-1765647 bp Feature: domain Description: rpsF Location: 1 765365-1 765647 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VirD4 (COG3505), SSB_OBF (cd04496), RVT-GII, HNHc (smart00507), EcCorA_ZntB-like_u2 (cd12827), rpsR (PRK00391), GIIM (pfam08388), PRK07275 (single-stranded DNA-binding protein; Provisional), rpsF (PRK14074)