myRT

myRT report for GCA_001713415.1_ASM171341v1

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Seq: CP016456.1 Sphingobium sp. RAC03 chromosome, complete genome (3232017 bp)
Overview 1 RT 1: 899209-904398 bp 2 RT 2: 1962345-1965265 bp Neighborhood of RT #1 [899209, 904412] HTH_XRE COG3800 RVT-Retrons CspC CspC Neighborhood of RT #2 [1962345, 1965265] SpoU EmrE RVT-Retrons HTH_XRE Feature: gene Location: 899209-899382 bp Feature: gene Location: 899521-900930 bp Ori: AOF97209.1 Feature: domain Description: HTH_XRE Location: 899560-899728 bp Feature: domain Description: HTH_XRE Location: 899560-899728 bp Feature: domain Description: COG3800 Location: 899950-900919 bp Feature: domain Description: COG3800 Location: 899950-90091 9 bp Feature: gene Location: 901220-902149 bp Ori: AOF96839.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 901325-901910 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 901 325-901 91 0 bp Feature: gene Location: 902146-903090 bp Feature: gene Location: 903540-904412 bp Ori: AOF96758.1 Feature: domain Description: CspC Location: 903870-904056 bp Feature: domain Description: CspC Location: 903870-904056 bp Feature: domain Description: CspC Location: 904206-904398 bp Feature: domain Description: CspC Location: 904206-904398 bp Feature: gene Location: 1962345-1963085 bp Ori: AOF96566.1 Feature: domain Description: SpoU Location: 1962396-1963077 bp Feature: domain Description: SpoU Location: 1 962396-1 963077 bp Feature: gene Location: 1963373-1963693 bp Ori: AOF97874.1 Gene: sugE Feature: domain Description: EmrE Location: 1963376-1963682 bp Feature: domain Description: EmrE Location: 1 963376-1 963682 bp Feature: gene Location: 1963869-1964759 bp Ori: AOF97167.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1964016-1964541 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 96401 6-1 964541 bp Feature: gene Location: 1964749-1965054 bp Ori: AOF96017.1 Feature: domain Description: HTH_XRE Location: 1964758-1964923 bp Feature: domain Description: HTH_XRE Location: 1 964758-1 964923 bp Feature: gene Location: 1965092-1965265 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), COG3800 (Predicted transcriptional regulator ), RVT-Retrons, CspC (COG1278), SpoU (COG0566), EmrE (pfam13536)