myRT

myRT report for GCA_001714725.1_ASM171472v1

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Seq: CP016447.1 Acidovorax sp. RAC01 chromosome, complete genome (4574859 bp)
Overview 1 RT 1: 729633-736967 bp Neighborhood of RT #1 [729633, 736984] COG2928 COG2331 RVT_N RVT-GII GIIM HNHc SLC5sbd_CHT ubiB Feature: gene Location: 729633-730253 bp Ori: AOG25136.1 Feature: domain Description: COG2928 Location: 729636-730227 bp Feature: domain Description: COG2928 Location: 729636-730227 bp Feature: gene Location: 730264-730602 bp Ori: AOG23267.1 Feature: domain Description: COG2331 Location: 730267-730489 bp Feature: domain Description: COG2331 Location: 730267-730489 bp Feature: gene Location: 730744-732474 bp Ori: AOG21562.1 Gene: ltrA Feature: domain Description: RVT_N Location: 730804-731047 bp Feature: domain Description: RVT_N Location: 730804-731 047 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 731095-731743 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 731 095-731 743 bp Feature: domain Description: GIIM Note: maturase Location: 731794-732028 bp Feature: domain Description: GIIM Note: maturase Location: 731 794-732028 bp Feature: domain Description: HNHc Note: nucleases Location: 732265-732406 bp Feature: domain Description: HNHc Note: nucleases Location: 732265-732406 bp Feature: gene Location: 733566-735020 bp Ori: AOG22625.1 Feature: domain Description: SLC5sbd_CHT Location: 733575-734970 bp Feature: domain Description: SLC5sbd_CHT Location: 733575-734970 bp Feature: gene Location: 735413-736984 bp Ori: AOG22441.1 Gene: ubiB Feature: domain Description: ubiB Location: 735416-736967 bp Feature: domain Description: ubiB Location: 73541 6-736967 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG2928 (Uncharacterized membrane protein ), COG2331 (Predicted nucleic acid-binding protein, contains Zn-ribbon domain ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), SLC5sbd_CHT (cd11474), ubiB (PRK04750)