myRT

myRT report for GCA_001715615.1_ASM171561v1

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Seq: CP015308.1 Lactobacillus plantarum strain LY-78, complete genome (3119435 bp)
Overview 1 RT 1: 998636-1003683 bp Neighborhood of RT #1 [998636, 1003931] fumC GIIM RVT-GII COG3666 DDE_Tnp_1 Feature: gene Location: 998636-1000018 bp Ori: AOG31826.1 Gene: fumC Feature: domain Description: fumC Location: 998639-1000007 bp Feature: domain Description: fumC Location: 998639-1 000007 bp Feature: gene Location: 1000493-1000828 bp Ori: AOG31827.1 Feature: domain Description: GIIM Note: maturase Location: 1000499-1000655 bp Feature: domain Description: GIIM Note: maturase Location: 1 000499-1 000655 bp Feature: gene Location: 1000866-1001432 bp Ori: AOG31828.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1000890-1001364 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 000890-1 001 364 bp Feature: gene Location: 1001723-1001866 bp Feature: gene Location: 1002159-1003931 bp Ori: AOG31830.1 Feature: domain Description: COG3666 Location: 1002177-1002618 bp Feature: domain Description: COG3666 Location: 1 0021 77-1 00261 8 bp Feature: domain Description: DDE_Tnp_1 Location: 1002930-1003683 bp Feature: domain Description: DDE_Tnp_1 Location: 1 002930-1 003683 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT fumC (PRK00485), GIIM (pfam08388), RVT-GII, COG3666 (Transposase ), DDE_Tnp_1 (pfam01609)