myRT

myRT report for GCA_001718815.1_ASM171881v1

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Seq: CP013441.1 Burkholderia vietnamiensis strain HI2297 chromosome 3, complete sequence (1240344 bp)
Overview 1 RT 1: 967855-972938 bp Neighborhood of RT #1 [967855, 972958] LrgB RVT-GII GIIM PRK03767 YhaK Feature: gene Location: 967855-968589 bp Ori: AOK14214.1 Feature: domain Description: LrgB Location: 967930-968566 bp Feature: domain Description: LrgB Location: 967930-968566 bp Feature: gene Location: 968879-969208 bp Feature: gene Location: 969645-971015 bp Ori: AOK14216.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 969981-970593 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 969981 -970593 bp Feature: domain Description: GIIM Note: maturase Location: 970653-970857 bp Feature: domain Description: GIIM Note: maturase Location: 970653-970857 bp Feature: gene Location: 971568-972170 bp Ori: AOK14217.1 Feature: domain Description: PRK03767 Location: 971571-972165 bp Feature: domain Description: PRK03767 Location: 971 571 -9721 65 bp Feature: gene Location: 972233-972958 bp Ori: AOK14218.1 Feature: domain Description: YhaK Location: 972236-972938 bp Feature: domain Description: YhaK Location: 972236-972938 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LrgB (pfam04172), RVT-GII, GIIM (pfam08388), PRK03767 (NAD(P)H:quinone oxidoreductase; Provisional), YhaK (COG1741)

Seq: CP013439.1 Burkholderia vietnamiensis strain HI2297 chromosome 1, complete sequence (3308896 bp)
Overview 1 RT 1: 2897368-2906390 bp Neighborhood of RT #1 [2897368, 2906404] DUF262 DUF1524 RVT-UG1 InsE PHA02517 Feature: gene Location: 2897368-2899152 bp Ori: AOK11105.1 Feature: domain Description: DUF262 Location: 2897422-2897971 bp Feature: domain Description: DUF2 62 Location: 2 89742 2 -2 897971 bp Feature: domain Description: DUF1524 Location: 2898880-2899108 bp Feature: domain Description: DUF152 4 Location: 2 898880-2 899108 bp Feature: gene Location: 2899573-2900973 bp Feature: gene Location: 2901500-2905003 bp Ori: AOK11107.1 Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 2901797-2902322 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 2 901797-2 902 32 2 bp Feature: gene Location: 2905230-2905532 bp Ori: AOK11108.1 Feature: domain Description: InsE Location: 2905248-2905527 bp Feature: domain Description: InsE Location: 2 9052 48-2 90552 7 bp Feature: gene Location: 2905553-2906404 bp Ori: AOK11645.1 Feature: domain Description: PHA02517 Location: 2905595-2906390 bp Feature: domain Description: PHA02 517 Location: 2 905595-2 906390 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF262 (pfam03235), DUF1524 (pfam07510), RVT-UG1, InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed)

Seq: CP013440.1 Burkholderia vietnamiensis strain HI2297 chromosome 2, complete sequence (2215292 bp)
Overview 1 RT 1: 1550050-1556927 bp Neighborhood of RT #1 [1550050, 1556980] Gmd GDP_MD_SDR_e RVT-GII GIIM PRK08133 PRK09246 Feature: gene Location: 1550050-1551096 bp Ori: AOK12834.1 Feature: domain Description: Gmd Location: 1550065-1551082 bp Feature: domain Description: Gmd Location: 1550065-1551082 bp Feature: gene Location: 1551083-1552051 bp Ori: AOK12835.1 Feature: domain Description: GDP_MD_SDR_e Location: 1551119-1552016 bp Feature: domain Description: GDP_MD_SDR_e Location: 1551119-1552016 bp Feature: gene Location: 1552193-1553563 bp Ori: AOK12836.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1552529-1553141 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1552529-1553 141 bp Feature: domain Description: GIIM Note: maturase Location: 1553201-1553405 bp Feature: domain Description: GIIM Note: maturase Location: 1553 201-1553 405 bp Feature: gene Location: 1554014-1555204 bp Ori: AOK12837.1 Feature: domain Description: PRK08133 Location: 1554020-1555196 bp Feature: domain Description: PRK0813 3 Location: 1554020-1555196 bp Feature: gene Location: 1555448-1556980 bp Ori: AOK12838.1 Feature: domain Description: PRK09246 Location: 1555451-1556927 bp Feature: domain Description: PRK09246 Location: 1555451-1556927 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Gmd (COG1089), GDP_MD_SDR_e (cd05260), RVT-GII, GIIM (pfam08388), PRK08133 (O-succinylhomoserine sulfhydrylase; Validated), PRK09246 (amidophosphoribosyltransferase; Provisional)