myRT

myRT report for GCA_001718895.1_ASM171889v1

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Seq: CP013451.1 Burkholderia cenocepacia strain MSMB384WGS chromosome 3, complete sequence (1121886 bp)
Overview 1 RT 1: 782002-787352 bp Neighborhood of RT #1 [782002, 787357] MFS_MucK Histone_HNS RVT-Retrons FIN his_ut_repres Feature: gene Location: 782002-783249 bp Ori: AOK36569.1 Feature: domain Description: MFS_MucK Location: 782092-783226 bp Feature: domain Description: MFS_MucK Location: 782092-783226 bp Feature: gene Location: 783536-783865 bp Ori: AOK36570.1 Feature: domain Description: Histone_HNS Location: 783557-783794 bp Feature: domain Description: Histone_HNS Location: 783557-783794 bp Feature: gene Location: 784191-785540 bp Ori: AOK36571.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 784656-785292 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 784656-785292 bp Feature: gene Location: 785794-786366 bp Ori: AOK36572.1 Feature: domain Description: FIN Location: 785980-786331 bp Feature: domain Description: FIN Location: 785980-786331 bp Feature: gene Location: 786602-787357 bp Ori: AOK36573.1 Feature: domain Description: his_ut_repres Location: 786680-787352 bp Feature: domain Description: his_ut_repres Location: 786680-787352 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MucK (cd17371), Histone_HNS (pfam00816), RVT-Retrons, FIN (cd16389), his_ut_repres (TIGR02018)

Seq: CP013450.1 Burkholderia cenocepacia strain MSMB384WGS chromosome 1, complete sequence (3588848 bp)
Overview 1 RT 1: 413575-421488 bp 2 RT 2: 424143-430810 bp Neighborhood of RT #1 [413575, 421488] PRK11798 PRK09692 RVT-UG16 PriCT_2 COG4643 DUF927 Neighborhood of RT #2 [424143, 430854] HNH_2 PRK05755 PRK14975 RVT-UG9 PinE InsE Feature: gene Location: 413575-414096 bp Ori: AOK33083.1 Feature: domain Description: PRK11798 Location: 413578-414094 bp Feature: domain Description: PRK11798 Location: 413578-414094 bp Feature: gene Location: 414376-415593 bp Ori: AOK33084.1 Feature: domain Description: PRK09692 Location: 414382-415567 bp Feature: domain Description: PRK09692 Location: 414382 -415567 bp Feature: gene Location: 415865-417361 bp Ori: AOK33085.1 Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 416228-416636 bp Feature: RT Description: RVT-UG16 Note: UG16 RT Location: 4162 2 8-416636 bp Feature: gene Location: 418173-421034 bp Ori: AOK33086.1 Feature: domain Description: PriCT_2 Location: 418197-418404 bp Feature: domain Description: PriCT_2 Location: 418197-418404 bp Feature: domain Description: COG4643 Location: 418467-419142 bp Feature: domain Description: COG4643 Location: 418467-419142 bp Feature: domain Description: DUF927 Location: 419274-420105 bp Feature: domain Description: DUF92 7 Location: 4192 74-42 0105 bp Feature: gene Location: 421162-421488 bp Feature: gene Location: 424143-425387 bp Ori: AOK33092.1 Feature: domain Description: HNH_2 Location: 425103-425250 bp Feature: domain Description: HNH_2 Location: 42 5103-42 52 50 bp Feature: gene Location: 425621-427213 bp Ori: AOK33093.1 Feature: domain Description: PRK05755 Location: 425933-426206 bp Feature: domain Description: PRK05755 Location: 42 5933-42 62 06 bp Feature: domain Description: PRK14975 Location: 426407-427112 bp Feature: domain Description: PRK14975 Location: 42 6407-42 7112 bp Feature: gene Location: 427206-428906 bp Ori: AOK33094.1 Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 427476-428112 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 42 7476-42 8112 bp Feature: gene Location: 429414-429989 bp Ori: AOK33095.1 Feature: domain Description: PinE Location: 429423-429972 bp Feature: domain Description: PinE Location: 42 942 3-42 9972 bp Feature: gene Location: 430447-430854 bp Ori: AOK33096.1 Feature: domain Description: InsE Location: 430486-430810 bp Feature: domain Description: InsE Location: 430486-430810 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11798 (ClpXP protease specificity-enhancing factor; Provisional), PRK09692 (Integrase; provisional), RVT-UG16, PriCT_2 (pfam08707), COG4643 (Uncharacterized domain associated with phage/plasmid primase ), DUF927 (pfam06048), HNH_2 (pfam13391), PRK05755 (DNA polymerase I; Provisional), PRK14975 (bifunctional 3'-5' exonuclease/DNA polymerase; Provisional), RVT-UG9
PinE (COG1961), InsE (COG2963)