myRT

myRT report for GCA_001718915.1_ASM171891v1

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Seq: CP013456.1 Burkholderia vietnamiensis strain MSMB608WGS chromosome 3, complete sequence (1210488 bp)
Overview 1 RT 1: 941186-946290 bp Neighborhood of RT #1 [941186, 946310] LrgB RVT-GII GIIM PRK03767 YhaK Feature: gene Location: 941186-941920 bp Ori: AOK45121.1 Feature: domain Description: LrgB Location: 941261-941897 bp Feature: domain Description: LrgB Location: 941 261 -941 897 bp Feature: gene Location: 942210-942539 bp Feature: gene Location: 942976-944346 bp Ori: AOK45123.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 943312-943924 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 94331 2-943924 bp Feature: domain Description: GIIM Note: maturase Location: 943984-944188 bp Feature: domain Description: GIIM Note: maturase Location: 943984-9441 88 bp Feature: gene Location: 944920-945522 bp Ori: AOK45124.1 Feature: domain Description: PRK03767 Location: 944923-945517 bp Feature: domain Description: PRK03767 Location: 944923-94551 7 bp Feature: gene Location: 945585-946310 bp Ori: AOK45125.1 Feature: domain Description: YhaK Location: 945588-946290 bp Feature: domain Description: YhaK Location: 945588-946290 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LrgB (pfam04172), RVT-GII, GIIM (pfam08388), PRK03767 (NAD(P)H:quinone oxidoreductase; Provisional), YhaK (COG1741)

Seq: CP013453.1 Burkholderia vietnamiensis strain MSMB608WGS chromosome 1, complete sequence (3322910 bp)
Overview 1 RT 1: 2585148-2588416 bp Neighborhood of RT #1 [2585148, 2588433] RVT-Retrons AAA_21 AAA_21 PinE Feature: gene Location: 2585148-2586116 bp Ori: AOK42458.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2585277-2585835 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 5852 77-2 585835 bp Feature: gene Location: 2586113-2587456 bp Ori: AOK41675.1 Feature: domain Description: AAA_21 Location: 2586194-2586344 bp Feature: domain Description: AAA_2 1 Location: 2 586194-2 586344 bp Feature: domain Description: AAA_21 Location: 2586686-2586857 bp Feature: domain Description: AAA_2 1 Location: 2 586686-2 586857 bp Feature: gene Location: 2587858-2588433 bp Ori: AOK41676.1 Feature: domain Description: PinE Location: 2587867-2588416 bp Feature: domain Description: PinE Location: 2 587867-2 588416 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, AAA_21 (pfam13304), PinE (COG1961)