myRT

myRT report for GCA_001720945.1_ASM172094v1

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Seq: CP012432.1 Enterococcus faecium strain ISMMS_VRE_1 plasmid ISMMS_VRE_p1, complete sequence (57543 bp)
Overview 1 RT 1: 970-4435 bp Neighborhood of RT #1 [970, 4554] RVT-GII HNHc Glucosaminidase Peptidase_M23 Feature: gene Location: 970-2847 bp Ori: AOM17709.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1285-2023 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 285-2023 bp Feature: domain Description: HNHc Note: nucleases Location: 2581-2734 bp Feature: domain Description: HNHc Note: nucleases Location: 2581 -2734 bp Feature: gene Location: 3035-3355 bp Feature: gene Location: 3355-4554 bp Ori: AOM17711.1 Feature: domain Description: Glucosaminidase Location: 3625-4021 bp Feature: domain Description: Glucosaminidase Location: 3625-4021 bp Feature: domain Description: Peptidase_M23 Location: 4198-4435 bp Feature: domain Description: Peptidase_M23 Location: 41 98-4435 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), Glucosaminidase (pfam01832), Peptidase_M23 (pfam01551)

Seq: CP012430.1 Enterococcus faecium strain ISMMS_VRE_1, complete genome (3130373 bp)
Overview 1 RT 1: 136056-139533 bp 2 RT 2: 2180418-2186679 bp 3 RT 3: 2591203-2595944 bp Neighborhood of RT #1 [136056, 139646] Glucosaminidase Peptidase_M23 RVT-GII HNHc Neighborhood of RT #2 [2180418, 2186822] ArdA RVT-GII HNHc HTH_XRE Rol_Rep_N Rep_trans FtsK Neighborhood of RT #3 [2591203, 2596021] ArdA RVT-GII HNHc DUF3789 HTH_XRE Rol_Rep_N Rep_trans Feature: gene Location: 136056-137261 bp Ori: AOM14863.1 Feature: domain Description: Glucosaminidase Location: 136332-136728 bp Feature: domain Description: Glucosaminidase Location: 136332 -13672 8 bp Feature: domain Description: Peptidase_M23 Location: 136905-137142 bp Feature: domain Description: Peptidase_M2 3 Location: 136905-137142 bp Feature: gene Location: 137261-137581 bp Feature: gene Location: 137769-139646 bp Ori: AOM14865.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 138084-138822 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 138084-13882 2 bp Feature: domain Description: HNHc Note: nucleases Location: 139380-139533 bp Feature: domain Description: HNHc Note: nucleases Location: 139380-139533 bp Feature: gene Location: 2180418-2180915 bp Ori: AOM16749.1 Feature: domain Description: ArdA Location: 2180436-2180901 bp Feature: domain Description: ArdA Location: 2 180436-2 180901 bp Feature: gene Location: 2181032-2181283 bp Feature: gene Location: 2181359-2183269 bp Ori: AOM16751.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2181692-2182430 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 181692 -2 182 430 bp Feature: domain Description: HNHc Note: nucleases Location: 2182985-2183150 bp Feature: domain Description: HNHc Note: nucleases Location: 2 182 985-2 183150 bp Feature: gene Location: 2184053-2185258 bp Ori: AOM16752.1 Feature: domain Description: HTH_XRE Location: 2184098-2184242 bp Feature: domain Description: HTH_XRE Location: 2 184098-2 1842 42 bp Feature: domain Description: Rol_Rep_N Location: 2184269-2184536 bp Feature: domain Description: Rol_Rep_N Location: 2 1842 69-2 184536 bp Feature: domain Description: Rep_trans Location: 2184560-2185169 bp Feature: domain Description: Rep_trans Location: 2 184560-2 185169 bp Feature: gene Location: 2185437-2186822 bp Ori: AOM16753.1 Feature: domain Description: FtsK Location: 2186046-2186679 bp Feature: domain Description: FtsK Location: 2 186046-2 186679 bp Feature: gene Location: 2591203-2591706 bp Ori: AOM17105.1 Feature: domain Description: ArdA Location: 2591221-2591692 bp Feature: domain Description: ArdA Location: 2 5912 2 1-2 591692 bp Feature: gene Location: 2591719-2591943 bp Feature: gene Location: 2592047-2593957 bp Ori: AOM17107.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2592380-2593118 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 592 380-2 593118 bp Feature: domain Description: HNHc Note: nucleases Location: 2593673-2593838 bp Feature: domain Description: HNHc Note: nucleases Location: 2 593673-2 593838 bp Feature: gene Location: 2594703-2594822 bp Ori: AOM17108.1 Feature: domain Description: DUF3789 Location: 2594712-2594805 bp Feature: domain Description: DUF3789 Location: 2 594712 -2 594805 bp Feature: gene Location: 2594837-2596021 bp Ori: AOM17109.1 Feature: domain Description: HTH_XRE Location: 2594867-2595011 bp Feature: domain Description: HTH_XRE Location: 2 594867-2 595011 bp Feature: domain Description: Rol_Rep_N Location: 2595044-2595308 bp Feature: domain Description: Rol_Rep_N Location: 2 595044-2 595308 bp Feature: domain Description: Rep_trans Location: 2595332-2595944 bp Feature: domain Description: Rep_trans Location: 2 595332 -2 595944 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Glucosaminidase (pfam01832), Peptidase_M23 (pfam01551), RVT-GII, HNHc (smart00507), ArdA (pfam07275), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486), FtsK (COG1674), DUF3789 (pfam12664)