myRT

myRT report for GCA_001729525.1_ASM172952v1

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Seq: CP017150.1 Brevibacterium aurantiacum strain SMQ-1335 chromosome, complete genome (4209935 bp)
Overview 1 RT 1: 1262025-1266405 bp 2 RT 2: 3124766-3128344 bp Neighborhood of RT #1 [1262025, 1266425] Phage_int_SAM_4 Phage_int_SAM_1 INT_RitA_C_like PHA02517 RVT-GII GIIM InsE Neighborhood of RT #2 [3124766, 3128364] PHA02517 RVT-GII GIIM InsE Feature: gene Location: 1262025-1263227 bp Feature: domain Description: Phage_int_SAM_4 Location: 1262061-1262148 bp Feature: domain Description: Phage_int_SAM_4 Location: 1 262061 -1 2621 48 bp Feature: domain Description: Phage_int_SAM_1 Location: 1262373-1262598 bp Feature: domain Description: Phage_int_SAM_1 Location: 1 262373-1 262598 bp Feature: domain Description: INT_RitA_C_like Location: 1262676-1263198 bp Feature: domain Description: INT_RitA_C_like Location: 1 262676-1 2631 98 bp Feature: gene Location: 1263327-1263455 bp Feature: domain Description: PHA02517 Location: 1263330-1263429 bp Feature: domain Description: PHA0251 7 Location: 1 263330-1 263429 bp Feature: gene Location: 1263656-1265089 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1263977-1264664 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 263977-1 264664 bp Feature: domain Description: GIIM Note: maturase Location: 1264739-1264964 bp Feature: domain Description: GIIM Note: maturase Location: 1 264739-1 264964 bp Feature: gene Location: 1265635-1266120 bp Feature: gene Location: 1266117-1266425 bp Feature: domain Description: InsE Location: 1266129-1266405 bp Feature: domain Description: InsE Location: 1 2661 29-1 266405 bp Feature: gene Location: 3124766-3124987 bp Feature: gene Location: 3125014-3125394 bp Feature: domain Description: PHA02517 Location: 3125017-3125365 bp Feature: domain Description: PHA0251 7 Location: 31 2501 7-31 25365 bp Feature: gene Location: 3125595-3127028 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3125916-3126603 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 2591 6-31 26603 bp Feature: domain Description: GIIM Note: maturase Location: 3126678-3126903 bp Feature: domain Description: GIIM Note: maturase Location: 31 26678-31 26903 bp Feature: gene Location: 3127574-3128059 bp Feature: gene Location: 3128056-3128364 bp Feature: domain Description: InsE Location: 3128068-3128344 bp Feature: domain Description: InsE Location: 31 28068-31 28344 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_int_SAM_4 (pfam13495), Phage_int_SAM_1 (pfam02899), INT_RitA_C_like (cd01188), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963)