myRT

myRT report for GCA_001750805.1_ASM175080v1

Download annotations/find similar RTs

Seq: CP017386.1 Klebsiella pneumoniae strain KP36 plasmid 1, complete sequence (155781 bp)
Overview 1 RT 1: 85233-90715 bp Neighborhood of RT #1 [85233, 90723] Plasmid_stab_B Plasmid_stab_B StbA RVT-GII PRK10276 umuC Feature: gene Location: 85233-85904 bp Ori: AOT67775.1 Feature: domain Description: Plasmid_stab_B Location: 85248-85455 bp Feature: domain Description: Plasmid_stab_B Location: 85248-85455 bp Feature: domain Description: Plasmid_stab_B Location: 85560-85767 bp Feature: domain Description: Plasmid_stab_B Location: 85560-85767 bp Feature: gene Location: 85907-86878 bp Ori: AOT67776.1 Feature: domain Description: StbA Location: 85910-86855 bp Feature: domain Description: StbA Location: 8591 0-86855 bp Feature: gene Location: 87127-88611 bp Ori: AOT67777.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87529-88219 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 87529-8821 9 bp Feature: gene Location: 89021-89452 bp Ori: AOT67778.1 Feature: domain Description: PRK10276 Location: 89072-89435 bp Feature: domain Description: PRK1 0276 Location: 89072-89435 bp Feature: gene Location: 89452-90723 bp Ori: AOT67779.1 Feature: domain Description: umuC Location: 89455-90715 bp Feature: domain Description: umuC Location: 89455-9071 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Plasmid_stab_B (pfam10784), StbA (pfam06406), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609)

Seq: CP017385.1 Klebsiella pneumoniae strain KP36 chromosome, complete genome (5367386 bp)
Overview 1 RT 1: 2112947-2118364 bp 2 RT 2: 3473041-3482629 bp 3 RT 3: 4554335-4562953 bp Neighborhood of RT #1 [2112947, 2118366] GT9_LPS_heptosyltransferase DinI RVT-GII PRK10276 umuC Neighborhood of RT #2 [3473041, 3482667] DUF4917 AAA_15 RVT-Retrons Nuc_deoxyrib_tr PBP2_CrgA_like_3 Neighborhood of RT #3 [4554335, 4562970] YqgA PRK09692 RVT-UG4 FimD FimC Feature: gene Location: 2112947-2114086 bp Ori: AOT64497.1 Feature: domain Description: GT9_LPS_heptosyltransferase Location: 2113130-2114030 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 2 113130-2 114030 bp Feature: gene Location: 2114257-2114499 bp Ori: AOT64498.1 Feature: domain Description: DinI Location: 2114308-2114488 bp Feature: domain Description: DinI Location: 2 114308-2 114488 bp Feature: gene Location: 2115116-2116600 bp Ori: AOT64499.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2115518-2116208 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 115518-2 1162 08 bp Feature: gene Location: 2116679-2117098 bp Ori: AOT64500.1 Feature: domain Description: PRK10276 Location: 2116682-2117093 bp Feature: domain Description: PRK102 76 Location: 2 116682 -2 117093 bp Feature: gene Location: 2117101-2118366 bp Ori: AOT64501.1 Feature: domain Description: umuC Location: 2117104-2118364 bp Feature: domain Description: umuC Location: 2 117104-2 118364 bp Feature: gene Location: 3473041-3474060 bp Ori: AOT65742.1 Feature: domain Description: DUF4917 Location: 3473101-3474025 bp Feature: domain Description: DUF4917 Location: 3473101-347402 5 bp Feature: gene Location: 3475459-3477705 bp Ori: AOT65743.1 Feature: domain Description: AAA_15 Location: 3475462-3476470 bp Feature: domain Description: AAA_15 Location: 3475462 -3476470 bp Feature: gene Location: 3477820-3478920 bp Ori: AOT65744.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3478000-3478534 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3478000-3478534 bp Feature: gene Location: 3479576-3480445 bp Ori: AOT65745.1 Feature: domain Description: Nuc_deoxyrib_tr Location: 3480098-3480269 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 3480098-34802 69 bp Feature: gene Location: 3481951-3482667 bp Feature: domain Description: PBP2_CrgA_like_3 Location: 3482023-3482629 bp Feature: domain Description: PBP2 _CrgA_like_3 Location: 3482 02 3-3482 62 9 bp Feature: gene Location: 4554335-4555048 bp Ori: AOT66711.1 Feature: domain Description: YqgA Location: 4554341-4555043 bp Feature: domain Description: YqgA Location: 4554341-4555043 bp Feature: gene Location: 4555572-4556810 bp Feature: domain Description: PRK09692 Location: 4555578-4556760 bp Feature: domain Description: PRK09692 Location: 4555578-4556760 bp Feature: gene Location: 4557487-4559568 bp Ori: AOT66712.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 4557898-4558342 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 4557898-4558342 bp Feature: gene Location: 4559565-4562159 bp Ori: AOT66713.1 Feature: domain Description: FimD Location: 4559607-4562148 bp Feature: domain Description: FimD Location: 4559607-4562 148 bp Feature: gene Location: 4562206-4562970 bp Ori: AOT66714.1 Feature: domain Description: FimC Location: 4562251-4562953 bp Feature: domain Description: FimC Location: 4562 2 51-4562 953 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GT9_LPS_heptosyltransferase (cd03789), DinI (pfam06183), RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), DUF4917 (pfam16263), AAA_15 (pfam13175), RVT-Retrons, Nuc_deoxyrib_tr (pfam05014), PBP2_CrgA_like_3 (cd08472)
YqgA (COG1811), PRK09692 (Integrase; provisional), RVT-UG4, FimD (COG3188), FimC (COG3121)