myRT

myRT report for GCA_001753205.1_ASM175320v1

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Seq: CP017560.1 Lysinibacillus sphaericus strain LMG 22257 chromosome, complete genome (3436578 bp)
Overview 1 RT 1: 1004642-1009926 bp 2 RT 2: 1089980-1096247 bp 3 RT 3: 1345244-1349896 bp Neighborhood of RT #1 [1004642, 1009955] MalY DUF1871 RVT-GII Tar Neighborhood of RT #2 [1089980, 1096294] SmpA_OmlA RVT-GII HNHc xerC TIGR01177 Neighborhood of RT #3 [1345244, 1349913] GlpF glpK RVT-GII XRE Feature: gene Location: 1004642-1005814 bp Ori: AOV07008.1 Feature: domain Description: MalY Location: 1004648-1005809 bp Feature: domain Description: MalY Location: 1 004648-1 005809 bp Feature: gene Location: 1005888-1006148 bp Ori: AOV07009.1 Feature: domain Description: DUF1871 Location: 1005918-1006143 bp Feature: domain Description: DUF1 871 Location: 1 00591 8-1 0061 43 bp Feature: gene Location: 1006722-1007582 bp Ori: AOV09096.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1006941-1007559 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 006941 -1 007559 bp Feature: gene Location: 1007732-1008003 bp Feature: gene Location: 1008249-1009955 bp Ori: AOV07010.1 Feature: domain Description: Tar Location: 1008660-1009926 bp Feature: domain Description: Tar Location: 1 008660-1 009926 bp Feature: gene Location: 1089980-1090306 bp Ori: AOV07071.1 Feature: domain Description: SmpA_OmlA Location: 1089992-1090193 bp Feature: domain Description: SmpA_OmlA Location: 1 089992-1 0901 93 bp Feature: gene Location: 1090475-1091005 bp Feature: gene Location: 1091855-1093630 bp Ori: AOV09106.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1092113-1092812 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0921 1 3-1 09281 2 bp Feature: domain Description: HNHc Note: nucleases Location: 1093385-1093520 bp Feature: domain Description: HNHc Note: nucleases Location: 1 093385-1 093520 bp Feature: gene Location: 1094129-1094971 bp Ori: AOV07073.1 Feature: domain Description: xerC Location: 1094171-1094960 bp Feature: domain Description: xerC Location: 1 0941 71 -1 094960 bp Feature: gene Location: 1095353-1096294 bp Ori: AOV07074.1 Feature: domain Description: TIGR01177 Location: 1095494-1096247 bp Feature: domain Description: TIGR01 1 77 Location: 1 095494-1 096247 bp Feature: gene Location: 1345244-1346074 bp Ori: AOV07277.1 Feature: domain Description: GlpF Location: 1345247-1345946 bp Feature: domain Description: GlpF Location: 1 345247-1 345946 bp Feature: gene Location: 1346113-1347606 bp Ori: AOV07278.1 Feature: domain Description: glpK Location: 1346119-1347601 bp Feature: domain Description: glpK Location: 1 3461 1 9-1 347601 bp Feature: gene Location: 1348260-1349120 bp Ori: AOV07279.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1348479-1349097 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 348479-1 349097 bp Feature: gene Location: 1349270-1349545 bp Feature: gene Location: 1349698-1349913 bp Ori: AOV07281.1 Feature: domain Description: XRE Location: 1349704-1349896 bp Feature: domain Description: XRE Location: 1 349704-1 349896 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MalY (COG1168), DUF1871 (pfam08958), RVT-GII, Tar (COG0840), SmpA_OmlA (pfam04355), HNHc (smart00507), xerC (PRK01287), TIGR01177 (putative methyltransferase, TIGR01177 family), GlpF (COG0580), glpK (PRK00047)
XRE (COG1476)