myRT

myRT report for GCA_001753485.1_ASM175348v1

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Seq: CP017445.1 Escherichia coli O157:H7 strain 8368 plasmid pO157, complete sequence (92726 bp)
Overview 1 RT 1: 53014-59463 bp Neighborhood of RT #1 [53014, 59463] PRK13705 PRK13698 RVT_N RVT-GII YkfC HNHc DUF1281 DUF1281_C Feature: gene Location: 53014-54180 bp Ori: AOV51491.1 Feature: domain Description: PRK13705 Location: 53017-54178 bp Feature: domain Description: PRK1 3705 Location: 5301 7-541 78 bp Feature: gene Location: 54180-55151 bp Ori: AOV51492.1 Feature: domain Description: PRK13698 Location: 54183-55146 bp Feature: domain Description: PRK1 3698 Location: 541 83-551 46 bp Feature: gene Location: 56451-58175 bp Ori: AOV51493.1 Feature: domain Description: RVT_N Location: 56508-56745 bp Feature: domain Description: RVT_N Location: 56508-56745 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56796-57444 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56796-57444 bp Feature: domain Description: YkfC Location: 57576-57732 bp Feature: domain Description: YkfC Location: 57576-57732 bp Feature: domain Description: HNHc Note: nucleases Location: 57960-58119 bp Feature: domain Description: HNHc Note: nucleases Location: 57960-581 1 9 bp Feature: gene Location: 58252-59154 bp Ori: AOV51494.1 Feature: domain Description: DUF1281 Location: 58321-58849 bp Feature: domain Description: DUF1 281 Location: 58321 -58849 bp Feature: domain Description: DUF1281_C Location: 58855-59083 bp Feature: domain Description: DUF1 281 _C Location: 58855-59083 bp Feature: gene Location: 59158-59463 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13705 (plasmid-partitioning protein SopA; Provisional), PRK13698 (ParB/RepB/Spo0J family plasmid partition protein), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507), DUF1281 (pfam06924), DUF1281_C (pfam18406)