myRT

myRT report for GCA_001753545.1_ASM175354v1

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Seq: CP017441.1 Escherichia coli O157:H7 strain 3384 plasmid pO157, complete sequence (92729 bp)
Overview 1 RT 1: 53023-59472 bp Neighborhood of RT #1 [53023, 59472] PRK13705 PRK13698 RVT_N RVT-GII YkfC HNHc DUF1281 DUF1281_C Feature: gene Location: 53023-54189 bp Ori: AOV40731.1 Feature: domain Description: PRK13705 Location: 53026-54187 bp Feature: domain Description: PRK1 3705 Location: 53026-541 87 bp Feature: gene Location: 54189-55160 bp Ori: AOV40732.1 Feature: domain Description: PRK13698 Location: 54192-55155 bp Feature: domain Description: PRK1 3698 Location: 541 92-551 55 bp Feature: gene Location: 56460-58184 bp Ori: AOV40733.1 Feature: domain Description: RVT_N Location: 56517-56754 bp Feature: domain Description: RVT_N Location: 5651 7-56754 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56805-57453 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56805-57453 bp Feature: domain Description: YkfC Location: 57585-57741 bp Feature: domain Description: YkfC Location: 57585-57741 bp Feature: domain Description: HNHc Note: nucleases Location: 57969-58128 bp Feature: domain Description: HNHc Note: nucleases Location: 57969-581 28 bp Feature: gene Location: 58261-59163 bp Ori: AOV40734.1 Feature: domain Description: DUF1281 Location: 58330-58858 bp Feature: domain Description: DUF1 281 Location: 58330-58858 bp Feature: domain Description: DUF1281_C Location: 58864-59092 bp Feature: domain Description: DUF1 281 _C Location: 58864-59092 bp Feature: gene Location: 59167-59472 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13705 (plasmid-partitioning protein SopA; Provisional), PRK13698 (ParB/RepB/Spo0J family plasmid partition protein), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507), DUF1281 (pfam06924), DUF1281_C (pfam18406)