myRT

myRT report for GCA_001806285.1_ASM180628v1

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Seq: CP017251.1 Escherichia coli strain NADC 5570/86-24/6564, complete sequence (5466770 bp)
Overview 1 RT 1: 2407344-2411884 bp Neighborhood of RT #1 [2407344, 2411901] Minor_tail_Z Phage_tail_U RVT_N RVT-GII YjdB phage_lambda_G Feature: gene Location: 2407344-2407922 bp Ori: AOX57622.1 Feature: domain Description: Minor_tail_Z Location: 2407353-2407920 bp Feature: domain Description: Minor_tail_Z Location: 2407353-2407920 bp Feature: gene Location: 2407919-2408248 bp Ori: AOX57623.1 Feature: domain Description: Phage_tail_U Location: 2407922-2408210 bp Feature: domain Description: Phage_tail_U Location: 2407922-240821 0 bp Feature: gene Location: 2408281-2410000 bp Feature: domain Description: RVT_N Location: 2408338-2408575 bp Feature: domain Description: RVT_N Location: 2408338-2408575 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2408920-2409154 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2408920-24091 54 bp Feature: gene Location: 2410723-2411463 bp Ori: AOX60488.1 Feature: domain Description: YjdB Location: 2410729-2411458 bp Feature: domain Description: YjdB Location: 241 0729-241 1 458 bp Feature: gene Location: 2411479-2411901 bp Ori: AOX57624.1 Feature: domain Description: phage_lambda_G Location: 2411482-2411884 bp Feature: domain Description: phage_lambda_G Location: 241 1 482-241 1 884 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Minor_tail_Z (pfam06763), Phage_tail_U (pfam06141), RVT_N (pfam13655), RVT-GII, YjdB (COG5492), phage_lambda_G (TIGR01674)

Seq: CP017252.1 Escherichia coli strain NADC 5570/86-24/6564 plasmid pO157, complete sequence (92691 bp)
Overview 1 RT 1: 79577-86024 bp Neighborhood of RT #1 [79577, 86026] DUF1281 DUF1281_C RVT_N RVT-GII YkfC HNHc PRK13698 PRK13705 Feature: gene Location: 79577-79882 bp Feature: gene Location: 79886-80788 bp Ori: AOX60714.1 Feature: domain Description: DUF1281 Location: 79955-80483 bp Feature: domain Description: DUF12 81 Location: 79955-80483 bp Feature: domain Description: DUF1281_C Location: 80489-80717 bp Feature: domain Description: DUF12 81_C Location: 80489-80717 bp Feature: gene Location: 80865-82589 bp Ori: AOX60715.1 Feature: domain Description: RVT_N Location: 80922-81159 bp Feature: domain Description: RVT_N Location: 8092 2 -81159 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81210-81858 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 812 10-81858 bp Feature: domain Description: YkfC Location: 81990-82146 bp Feature: domain Description: YkfC Location: 81990-82 146 bp Feature: domain Description: HNHc Note: nucleases Location: 82374-82533 bp Feature: domain Description: HNHc Note: nucleases Location: 82 374-82 533 bp Feature: gene Location: 83889-84860 bp Ori: AOX60716.1 Feature: domain Description: PRK13698 Location: 83892-84855 bp Feature: domain Description: PRK13698 Location: 83892 -84855 bp Feature: gene Location: 84860-86026 bp Ori: AOX60717.1 Feature: domain Description: PRK13705 Location: 84863-86024 bp Feature: domain Description: PRK13705 Location: 84863-8602 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1281 (pfam06924), DUF1281_C (pfam18406), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507), PRK13698 (ParB/RepB/Spo0J family plasmid partition protein), PRK13705 (plasmid-partitioning protein SopA; Provisional)