myRT

myRT report for GCA_001854305.1_ASM185430v1

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Seq: CP017748.1 Cupriavidus sp. USMAA2-4 chromosome 1, complete sequence (4493942 bp)
Overview 1 RT 1: 1257953-1267486 bp 2 RT 2: 3320325-3326054 bp Neighborhood of RT #1 [1257953, 1267506] GT9_LPS_heptosyltransferase dnaE RVT_N RVT-GII GIIM HNHc PRK05320 CoAse Neighborhood of RT #2 [3320325, 3326095] RpmB PRK00024 RVT_N RVT-GII GIIM HNHc SlpA ispH Feature: gene Location: 1257953-1259167 bp Ori: AOY91353.1 Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1257995-1259051 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 257995-1 259051 bp Feature: gene Location: 1259273-1262773 bp Ori: AOY91354.1 Feature: domain Description: dnaE Location: 1259288-1262738 bp Feature: domain Description: dnaE Location: 1 259288-1 262738 bp Feature: gene Location: 1264088-1265788 bp Ori: AOY91355.1 Feature: domain Description: RVT_N Location: 1264145-1264388 bp Feature: domain Description: RVT_N Location: 1 2641 45-1 264388 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1264433-1265081 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 264433-1 265081 bp Feature: domain Description: GIIM Note: maturase Location: 1265132-1265366 bp Feature: domain Description: GIIM Note: maturase Location: 1 2651 32-1 265366 bp Feature: domain Description: HNHc Note: nucleases Location: 1265585-1265750 bp Feature: domain Description: HNHc Note: nucleases Location: 1 265585-1 265750 bp Feature: gene Location: 1265951-1266793 bp Ori: AOY91356.1 Feature: domain Description: PRK05320 Location: 1265954-1266719 bp Feature: domain Description: PRK05320 Location: 1 265954-1 26671 9 bp Feature: gene Location: 1266826-1267506 bp Ori: AOY91357.1 Feature: domain Description: CoAse Location: 1267006-1267486 bp Feature: domain Description: CoAse Location: 1 267006-1 267486 bp Feature: gene Location: 3320325-3320558 bp Ori: AOY92905.1 Feature: domain Description: RpmB Location: 3320328-3320550 bp Feature: domain Description: RpmB Location: 3320328-3320550 bp Feature: gene Location: 3320812-3321486 bp Ori: AOY92906.1 Feature: domain Description: PRK00024 Location: 3320815-3321481 bp Feature: domain Description: PRK00024 Location: 332081 5-3321 481 bp Feature: gene Location: 3322759-3324474 bp Ori: AOY92907.1 Feature: domain Description: RVT_N Location: 3322816-3323059 bp Feature: domain Description: RVT_N Location: 332281 6-3323059 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3323104-3323752 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33231 04-3323752 bp Feature: domain Description: GIIM Note: maturase Location: 3323806-3324037 bp Feature: domain Description: GIIM Note: maturase Location: 3323806-3324037 bp Feature: domain Description: HNHc Note: nucleases Location: 3324256-3324421 bp Feature: domain Description: HNHc Note: nucleases Location: 3324256-3324421 bp Feature: gene Location: 3324572-3325063 bp Ori: AOY92908.1 Feature: domain Description: SlpA Location: 3324632-3325058 bp Feature: domain Description: SlpA Location: 3324632-3325058 bp Feature: gene Location: 3325136-3326095 bp Ori: AOY92909.1 Feature: domain Description: ispH Location: 3325169-3326054 bp Feature: domain Description: ispH Location: 33251 69-3326054 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GT9_LPS_heptosyltransferase (cd03789), dnaE (PRK07374), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PRK05320 (rhodanese superfamily protein; Provisional), CoAse (cd03426), RpmB (COG0227), PRK00024 (DNA repair protein RadC)
SlpA (COG1047), ispH (PRK01045)