myRT

myRT report for GCA_001854425.1_ASM185442v1

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Seq: CP013014.1 Vibrio cholerae strain Env-390 chromosome 2, complete sequence (2925021 bp)
Overview 1 RT 1: 2021809-2026948 bp Neighborhood of RT #1 [2021809, 2027070] LysR PRK10621 RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 2021809-2022669 bp Ori: AOY51641.1 Feature: domain Description: LysR Location: 2021815-2022643 bp Feature: domain Description: LysR Location: 2021 81 5-2022643 bp Feature: gene Location: 2022599-2023384 bp Ori: AOY51642.1 Feature: domain Description: PRK10621 Location: 2022608-2023379 bp Feature: domain Description: PRK1 0621 Location: 2022608-2023379 bp Feature: gene Location: 2023870-2024817 bp Ori: AOY51643.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2023984-2024581 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2023984-2024581 bp Feature: gene Location: 2024818-2026440 bp Ori: AOY51644.1 Feature: domain Description: COG3950 Location: 2025004-2026435 bp Feature: domain Description: COG3950 Location: 2025004-2026435 bp Feature: gene Location: 2026453-2027070 bp Ori: AOY51645.1 Feature: domain Description: TIGR02646 Location: 2026564-2026948 bp Feature: domain Description: TIGR02646 Location: 2026564-2026948 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LysR (COG0583), PRK10621 (hypothetical protein; Provisional), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)

Seq: CP013013.1 Vibrio cholerae strain Env-390 chromosome 1, complete sequence (1125906 bp)
Overview 1 RT 1: 387727-392354 bp Neighborhood of RT #1 [387727, 392872] PRK06939 tdh RVT-Retrons YbjD Feature: gene Location: 387727-388920 bp Ori: AOY49162.1 Gene: kbl Feature: domain Description: PRK06939 Location: 387730-388918 bp Feature: domain Description: PRK06939 Location: 387730-388918 bp Feature: gene Location: 388923-389954 bp Ori: AOY49163.1 Gene: tdh Feature: domain Description: tdh Location: 388932-389952 bp Feature: domain Description: tdh Location: 388932 -389952 bp Feature: gene Location: 390349-391449 bp Ori: AOY49164.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 390493-391048 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 390493-391048 bp Feature: gene Location: 391449-391628 bp Feature: gene Location: 391625-392872 bp Ori: AOY49166.1 Feature: domain Description: YbjD Location: 391706-392354 bp Feature: domain Description: YbjD Location: 391706-392 354 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK06939 (2-amino-3-ketobutyrate coenzyme A ligase; Provisional), tdh (TIGR00692), RVT-Retrons, YbjD (COG3593)