myRT

myRT report for GCA_001856645.1_ASM185664v1

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Seq: CP013018.1 Clostridium pasteurianum DSM 525 = ATCC 6013, complete genome (4352852 bp)
Overview 1 RT 1: 974071-978018 bp 2 RT 2: 2296600-2301760 bp 3 RT 3: 4135263-4146388 bp Neighborhood of RT #1 [974071, 978092] WrbA WrbA RVT-GII GIIM PRK07714 Neighborhood of RT #2 [2296600, 2301795] PerM YrrD RVT-GII GIIM NifU_clost FeS_nifS Neighborhood of RT #3 [4135263, 4146396] BaeS OmpR RVT-GII GIIM group_II_RT_mat HTH_32 rve Mu-transpos_C pepcterm_ATPase RVT-GII RVT-GII MFS_MdfA_MDR_like trans_reg_C Feature: gene Location: 974071-974652 bp Ori: AOZ74367.1 Feature: domain Description: WrbA Location: 974074-974482 bp Feature: domain Description: WrbA Location: 974074-974482 bp Feature: gene Location: 974645-975316 bp Ori: AOZ74368.1 Feature: domain Description: WrbA Location: 974783-974951 bp Feature: domain Description: WrbA Location: 974783-974951 bp Feature: gene Location: 976009-976701 bp Ori: AOZ74369.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 976033-976336 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 976033-976336 bp Feature: domain Description: GIIM Note: maturase Location: 976420-976612 bp Feature: domain Description: GIIM Note: maturase Location: 976420-97661 2 bp Feature: gene Location: 976884-977072 bp Feature: gene Location: 977607-978092 bp Ori: AOZ74371.1 Feature: domain Description: PRK07714 Location: 977874-978018 bp Feature: domain Description: PRK0771 4 Location: 977874-97801 8 bp Feature: gene Location: 2296600-2297613 bp Ori: AOZ75478.1 Feature: domain Description: PerM Location: 2296615-2297599 bp Feature: domain Description: PerM Location: 229661 5-2297599 bp Feature: gene Location: 2297597-2298106 bp Ori: AOZ75479.1 Feature: domain Description: YrrD Location: 2297600-2298101 bp Feature: domain Description: YrrD Location: 2297600-22981 01 bp Feature: gene Location: 2298229-2299515 bp Ori: AOZ75480.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2298478-2299162 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2298478-22991 62 bp Feature: domain Description: GIIM Note: maturase Location: 2299234-2299459 bp Feature: domain Description: GIIM Note: maturase Location: 2299234-2299459 bp Feature: gene Location: 2300168-2300599 bp Ori: AOZ75481.1 Feature: domain Description: NifU_clost Location: 2300177-2300531 bp Feature: domain Description: NifU_clost Location: 23001 77-2300531 bp Feature: gene Location: 2300602-2301795 bp Ori: AOZ75482.1 Feature: domain Description: FeS_nifS Location: 2300620-2301760 bp Feature: domain Description: FeS_nifS Location: 2300620-2301 760 bp Feature: gene Location: 4135263-4136522 bp Ori: AOZ77054.1 Feature: domain Description: BaeS Location: 4135578-4136508 bp Feature: domain Description: BaeS Location: 41 35578-41 36508 bp Feature: gene Location: 4136519-4137211 bp Ori: AOZ77055.1 Feature: domain Description: OmpR Location: 4136528-4137188 bp Feature: domain Description: OmpR Location: 41 36528-41 371 88 bp Feature: gene Location: 4137334-4138134 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4137337-4137781 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 37337-41 37781 bp Feature: domain Description: GIIM Note: maturase Location: 4137853-4138078 bp Feature: domain Description: GIIM Note: maturase Location: 41 37853-41 38078 bp Feature: gene Location: 4138247-4138720 bp Ori: AOZ77056.1 Feature: domain Description: group_II_RT_mat Note: maturase Location: 4138250-4138631 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 41 38250-41 38631 bp Feature: gene Location: 4138933-4139505 bp Feature: gene Location: 4139707-4140966 bp Ori: AOZ77395.1 Feature: domain Description: HTH_32 Location: 4139875-4140103 bp Feature: domain Description: HTH_32 Location: 41 39875-41 401 03 bp Feature: domain Description: rve Location: 4140178-4140523 bp Feature: domain Description: rve Location: 41 401 78-41 40523 bp Feature: domain Description: Mu-transpos_C Location: 4140703-4140865 bp Feature: domain Description: Mu-transpos_C Location: 41 40703-41 40865 bp Feature: gene Location: 4140982-4141788 bp Ori: AOZ77058.1 Feature: domain Description: pepcterm_ATPase Location: 4140985-4141771 bp Feature: domain Description: pepcterm_ATPase Location: 41 40985-41 41 771 bp Feature: gene Location: 4141990-4142793 bp Ori: AOZ77059.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4142245-4142764 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 42245-41 42764 bp Feature: gene Location: 4142800-4142979 bp Feature: gene Location: 4143292-4143774 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4143541-4143775 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 43541 -41 43775 bp Feature: gene Location: 4144433-4145653 bp Ori: AOZ77061.1 Feature: domain Description: MFS_MdfA_MDR_like Location: 4144508-4145621 bp Feature: domain Description: MFS_MdfA_MDR_like Location: 41 44508-41 45621 bp Feature: gene Location: 4145962-4146396 bp Ori: AOZ77062.1 Feature: domain Description: trans_reg_C Location: 4146190-4146388 bp Feature: domain Description: trans_reg_C Location: 41 461 90-41 46388 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WrbA (COG0655), RVT-GII, GIIM (pfam08388), PRK07714 (YlxQ family RNA-binding protein), PerM (COG0628), YrrD (COG3881), NifU_clost (TIGR03419), FeS_nifS (TIGR03402), BaeS (COG0642), OmpR (COG0745)
group_II_RT_mat (TIGR04416), HTH_32 (pfam13565), rve (pfam00665), Mu-transpos_C (pfam09299), pepcterm_ATPase (TIGR03015), MFS_MdfA_MDR_like (cd17320), trans_reg_C (cd00383)