myRT

myRT report for GCA_001856695.1_ASM185669v1

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Seq: CP013019.1 Clostridium pasteurianum strain M150B, complete genome (4351863 bp)
Overview 1 RT 1: 974072-978019 bp 2 RT 2: 2295611-2300771 bp 3 RT 3: 4134274-4145399 bp Neighborhood of RT #1 [974072, 978093] WrbA WrbA RVT-GII GIIM PRK07714 Neighborhood of RT #2 [2295611, 2300806] PerM YrrD RVT-GII GIIM NifU_clost FeS_nifS Neighborhood of RT #3 [4134274, 4145407] BaeS OmpR RVT-GII GIIM group_II_RT_mat HTH_32 rve Mu-transpos_C pepcterm_ATPase RVT-GII RVT-GII MFS_MdfA_MDR_like trans_reg_C Feature: gene Location: 974072-974653 bp Ori: AOZ78165.1 Feature: domain Description: WrbA Location: 974075-974483 bp Feature: domain Description: WrbA Location: 974075-974483 bp Feature: gene Location: 974646-975317 bp Ori: AOZ78166.1 Feature: domain Description: WrbA Location: 974784-974952 bp Feature: domain Description: WrbA Location: 974784-974952 bp Feature: gene Location: 976010-976702 bp Ori: AOZ78167.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 976034-976337 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 976034-976337 bp Feature: domain Description: GIIM Note: maturase Location: 976421-976613 bp Feature: domain Description: GIIM Note: maturase Location: 976421 -97661 3 bp Feature: gene Location: 976885-977073 bp Feature: gene Location: 977608-978093 bp Ori: AOZ78169.1 Feature: domain Description: PRK07714 Location: 977875-978019 bp Feature: domain Description: PRK0771 4 Location: 977875-97801 9 bp Feature: gene Location: 2295611-2296624 bp Ori: AOZ79273.1 Feature: domain Description: PerM Location: 2295626-2296610 bp Feature: domain Description: PerM Location: 2295626-229661 0 bp Feature: gene Location: 2296608-2297117 bp Ori: AOZ79274.1 Feature: domain Description: YrrD Location: 2296611-2297112 bp Feature: domain Description: YrrD Location: 229661 1 -22971 1 2 bp Feature: gene Location: 2297240-2298526 bp Ori: AOZ79275.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2297489-2298173 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2297489-22981 73 bp Feature: domain Description: GIIM Note: maturase Location: 2298245-2298470 bp Feature: domain Description: GIIM Note: maturase Location: 2298245-2298470 bp Feature: gene Location: 2299179-2299610 bp Ori: AOZ79276.1 Feature: domain Description: NifU_clost Location: 2299188-2299542 bp Feature: domain Description: NifU_clost Location: 22991 88-2299542 bp Feature: gene Location: 2299613-2300806 bp Ori: AOZ79277.1 Feature: domain Description: FeS_nifS Location: 2299631-2300771 bp Feature: domain Description: FeS_nifS Location: 2299631 -2300771 bp Feature: gene Location: 4134274-4135533 bp Ori: AOZ80851.1 Feature: domain Description: BaeS Location: 4134589-4135519 bp Feature: domain Description: BaeS Location: 41 34589-41 3551 9 bp Feature: gene Location: 4135530-4136222 bp Ori: AOZ80852.1 Feature: domain Description: OmpR Location: 4135539-4136199 bp Feature: domain Description: OmpR Location: 41 35539-41 361 99 bp Feature: gene Location: 4136345-4137145 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4136348-4136792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 36348-41 36792 bp Feature: domain Description: GIIM Note: maturase Location: 4136864-4137089 bp Feature: domain Description: GIIM Note: maturase Location: 41 36864-41 37089 bp Feature: gene Location: 4137258-4137731 bp Ori: AOZ80853.1 Feature: domain Description: group_II_RT_mat Note: maturase Location: 4137261-4137642 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 41 37261 -41 37642 bp Feature: gene Location: 4137944-4138516 bp Feature: gene Location: 4138718-4139977 bp Ori: AOZ81191.1 Feature: domain Description: HTH_32 Location: 4138886-4139114 bp Feature: domain Description: HTH_32 Location: 41 38886-41 391 1 4 bp Feature: domain Description: rve Location: 4139189-4139534 bp Feature: domain Description: rve Location: 41 391 89-41 39534 bp Feature: domain Description: Mu-transpos_C Location: 4139714-4139876 bp Feature: domain Description: Mu-transpos_C Location: 41 3971 4-41 39876 bp Feature: gene Location: 4139993-4140799 bp Ori: AOZ80855.1 Feature: domain Description: pepcterm_ATPase Location: 4139996-4140782 bp Feature: domain Description: pepcterm_ATPase Location: 41 39996-41 40782 bp Feature: gene Location: 4141001-4141804 bp Ori: AOZ80856.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4141256-4141775 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 41 256-41 41 775 bp Feature: gene Location: 4141811-4141990 bp Feature: gene Location: 4142303-4142785 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4142552-4142786 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 42552-41 42786 bp Feature: gene Location: 4143444-4144664 bp Ori: AOZ80858.1 Feature: domain Description: MFS_MdfA_MDR_like Location: 4143519-4144632 bp Feature: domain Description: MFS_MdfA_MDR_like Location: 41 4351 9-41 44632 bp Feature: gene Location: 4144973-4145407 bp Ori: AOZ80859.1 Feature: domain Description: trans_reg_C Location: 4145201-4145399 bp Feature: domain Description: trans_reg_C Location: 41 45201 -41 45399 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WrbA (COG0655), RVT-GII, GIIM (pfam08388), PRK07714 (YlxQ family RNA-binding protein), PerM (COG0628), YrrD (COG3881), NifU_clost (TIGR03419), FeS_nifS (TIGR03402), BaeS (COG0642), OmpR (COG0745)
group_II_RT_mat (TIGR04416), HTH_32 (pfam13565), rve (pfam00665), Mu-transpos_C (pfam09299), pepcterm_ATPase (TIGR03015), MFS_MdfA_MDR_like (cd17320), trans_reg_C (cd00383)