myRT

myRT report for GCA_001865295.1_ASM186529v1

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Seq: CP017670.1 Escherichia coli strain PA20 plasmid pO157, complete sequence (92755 bp)
Overview 1 RT 1: 25973-32422 bp Neighborhood of RT #1 [25973, 32422] PRK13705 PRK13698 RVT_N RVT-GII YkfC HNHc DUF1281 DUF1281_C Feature: gene Location: 25973-27139 bp Ori: APA44851.1 Feature: domain Description: PRK13705 Location: 25976-27137 bp Feature: domain Description: PRK1 3705 Location: 25976-271 37 bp Feature: gene Location: 27139-28110 bp Ori: APA44852.1 Feature: domain Description: PRK13698 Location: 27142-28105 bp Feature: domain Description: PRK1 3698 Location: 271 42-281 05 bp Feature: gene Location: 29410-31134 bp Ori: APA44853.1 Feature: domain Description: RVT_N Location: 29467-29704 bp Feature: domain Description: RVT_N Location: 29467-29704 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29755-30403 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29755-30403 bp Feature: domain Description: YkfC Location: 30535-30691 bp Feature: domain Description: YkfC Location: 30535-30691 bp Feature: domain Description: HNHc Note: nucleases Location: 30919-31078 bp Feature: domain Description: HNHc Note: nucleases Location: 3091 9-31 078 bp Feature: gene Location: 31211-32113 bp Ori: APA44854.1 Feature: domain Description: DUF1281 Location: 31280-31808 bp Feature: domain Description: DUF1 281 Location: 31 280-31 808 bp Feature: domain Description: DUF1281_C Location: 31814-32042 bp Feature: domain Description: DUF1 281 _C Location: 31 81 4-32042 bp Feature: gene Location: 32117-32422 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13705 (plasmid-partitioning protein SopA; Provisional), PRK13698 (ParB/RepB/Spo0J family plasmid partition protein), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507), DUF1281 (pfam06924), DUF1281_C (pfam18406)