myRT

myRT report for GCA_001865575.1_ASM186557v1

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Seq: CP017562.1 Paraburkholderia sprentiae WSM5005 chromosome 2, complete sequence (2657711 bp)
Overview 1 RT 1: 2578237-2583738 bp Neighborhood of RT #1 [2578237, 2583738] DadA RVT-GII DDE_Tnp_1_2 Feature: gene Location: 2578237-2579526 bp Ori: APA89033.1 Feature: domain Description: DadA Location: 2578279-2579503 bp Feature: domain Description: DadA Location: 2578279-2579503 bp Feature: gene Location: 2580122-2580331 bp Feature: gene Location: 2580430-2581689 bp Ori: APA89374.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2580634-2581321 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2580634-2581 321 bp Feature: gene Location: 2582763-2583143 bp Ori: APA89035.1 Feature: domain Description: DDE_Tnp_1_2 Location: 2582880-2583114 bp Feature: domain Description: DDE_Tnp_1 _2 Location: 2582880-25831 1 4 bp Feature: gene Location: 2583235-2583738 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DadA (COG0665), RVT-GII, DDE_Tnp_1_2 (pfam13586)

Seq: CP017565.1 Paraburkholderia sprentiae WSM5005 plasmid pl2WSM5005, complete sequence (438974 bp)
Overview 1 RT 1: 130764-137667 bp 2 RT 2: 417926-423040 bp Neighborhood of RT #1 [130764, 138894] PRTRC_parB PRK05755 PRK14975 RVT-UG9 Methyltransf_25 Neighborhood of RT #2 [417926, 423051] SLC5sbd SLC5sbd PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 130764-132443 bp Ori: APA90409.1 Feature: domain Description: PRTRC_parB Location: 130797-132441 bp Feature: domain Description: PRTRC_parB Location: 130797-132 441 bp Feature: gene Location: 132811-134415 bp Ori: APA90410.1 Feature: domain Description: PRK05755 Location: 133120-133378 bp Feature: domain Description: PRK05755 Location: 13312 0-133378 bp Feature: domain Description: PRK14975 Location: 133597-134260 bp Feature: domain Description: PRK14975 Location: 133597-1342 60 bp Feature: gene Location: 134408-136096 bp Ori: APA90411.1 Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 134666-135302 bp Feature: RT Description: RVT-UG9 Note: UG9 RT Location: 134666-135302 bp Feature: gene Location: 136996-137232 bp Feature: gene Location: 137229-138894 bp Feature: domain Description: Methyltransf_25 Location: 137460-137667 bp Feature: domain Description: Methyltransf_2 5 Location: 137460-137667 bp Feature: gene Location: 417926-419164 bp Ori: APA90661.1 Feature: domain Description: SLC5sbd Location: 417935-418796 bp Feature: domain Description: SLC5sbd Location: 417935-418796 bp Feature: domain Description: SLC5sbd Location: 418844-419120 bp Feature: domain Description: SLC5sbd Location: 418844-41912 0 bp Feature: gene Location: 419530-420027 bp Feature: domain Description: PHA02517 Location: 419539-420001 bp Feature: domain Description: PHA02 517 Location: 419539-42 0001 bp Feature: gene Location: 420112-421629 bp Ori: APA90606.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 420370-421108 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 0370-42 1108 bp Feature: domain Description: GIIM Note: maturase Location: 421222-421381 bp Feature: domain Description: GIIM Note: maturase Location: 42 12 2 2 -42 1381 bp Feature: gene Location: 422311-422671 bp Feature: domain Description: PHA02517 Location: 422314-422413 bp Feature: domain Description: PHA02 517 Location: 42 2 314-42 2 413 bp Feature: gene Location: 422728-423051 bp Ori: APA90607.1 Feature: domain Description: InsE Location: 422746-423040 bp Feature: domain Description: InsE Location: 42 2 746-42 3040 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRTRC_parB (TIGR03734), PRK05755 (DNA polymerase I; Provisional), PRK14975 (bifunctional 3'-5' exonuclease/DNA polymerase; Provisional), RVT-UG9, Methyltransf_25 (pfam13649), SLC5sbd (cd10322), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963)