myRT

myRT report for GCA_001870165.1_ASM187016v1

Download annotations/find similar RTs

Seq: CP017934.1 Klebsiella pneumoniae strain CAV1016 chromosome, complete genome (5387681 bp)
Overview 1 RT 1: 1116535-1121899 bp 2 RT 2: 4953261-4959073 bp Neighborhood of RT #1 [1116535, 1121955] umuC PRK10276 RVT-GII DinI GT9_LPS_heptosyltransferase Neighborhood of RT #2 [4953261, 4959075] umuC RVT-UG11 PRK09951 YejM Feature: gene Location: 1116535-1117800 bp Ori: APB49515.1 Feature: domain Description: umuC Location: 1116538-1117798 bp Feature: domain Description: umuC Location: 1 1 1 6538-1 1 1 7798 bp Feature: gene Location: 1117803-1118222 bp Ori: APB49516.1 Feature: domain Description: PRK10276 Location: 1117806-1118217 bp Feature: domain Description: PRK1 0276 Location: 1 1 1 7806-1 1 1 821 7 bp Feature: gene Location: 1118301-1119785 bp Ori: APB49517.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1118703-1119393 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 1 8703-1 1 1 9393 bp Feature: gene Location: 1120403-1120645 bp Ori: APB49518.1 Feature: domain Description: DinI Location: 1120454-1120634 bp Feature: domain Description: DinI Location: 1 1 20454-1 1 20634 bp Feature: gene Location: 1120816-1121955 bp Ori: APB49519.1 Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1120999-1121899 bp Feature: domain Description: GT9_LPS_heptosyltransferase Location: 1 1 20999-1 1 21 899 bp Feature: gene Location: 4953261-4954526 bp Ori: APB53060.1 Feature: domain Description: umuC Location: 4953264-4954524 bp Feature: domain Description: umuC Location: 4953264-4954524 bp Feature: gene Location: 4954682-4954939 bp Feature: gene Location: 4955328-4956107 bp Ori: APB53626.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 4955472-4955928 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 4955472-4955928 bp Feature: gene Location: 4956308-4956976 bp Ori: APB53062.1 Feature: domain Description: PRK09951 Location: 4956311-4956974 bp Feature: domain Description: PRK09951 Location: 495631 1 -4956974 bp Feature: gene Location: 4957315-4959075 bp Ori: APB53063.1 Feature: domain Description: YejM Location: 4957318-4959073 bp Feature: domain Description: YejM Location: 495731 8-4959073 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, DinI (pfam06183), GT9_LPS_heptosyltransferase (cd03789), RVT-UG11, PRK09951 (hypothetical protein; Provisional), YejM (COG3083)

Seq: CP017935.1 Klebsiella pneumoniae strain CAV1016 plasmid pCAV1016-90, complete sequence (89621 bp)
Overview 1 RT 1: 23519-28872 bp Neighborhood of RT #1 [23519, 29009] umuC PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 23519-24790 bp Ori: APB53672.1 Feature: domain Description: umuC Location: 23522-24782 bp Feature: domain Description: umuC Location: 2 352 2 -2 4782 bp Feature: gene Location: 24790-25221 bp Ori: APB53673.1 Feature: domain Description: PRK10276 Location: 24841-25204 bp Feature: domain Description: PRK102 76 Location: 2 4841-2 52 04 bp Feature: gene Location: 25631-27115 bp Ori: APB53674.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26033-26723 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 6033-2 672 3 bp Feature: gene Location: 27364-28335 bp Feature: domain Description: StbA Location: 27367-28312 bp Feature: domain Description: StbA Location: 2 7367-2 8312 bp Feature: gene Location: 28338-29009 bp Ori: APB53675.1 Feature: domain Description: Plasmid_stab_B Location: 28353-28560 bp Feature: domain Description: Plasmid_stab_B Location: 2 8353-2 8560 bp Feature: domain Description: Plasmid_stab_B Location: 28665-28872 bp Feature: domain Description: Plasmid_stab_B Location: 2 8665-2 8872 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)