myRT

myRT report for GCA_001870185.1_ASM187018v1

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Seq: CP017930.1 Klebsiella oxytoca strain CAV1015 plasmid pCAV1015-114, complete sequence (114139 bp)
Overview 1 RT 1: 78564-83570 bp Neighborhood of RT #1 [78564, 83570] HHA RVT-GII INT_Cre_C Feature: gene Location: 78564-79625 bp Feature: gene Location: 79711-79965 bp Ori: APB48168.1 Feature: domain Description: HHA Location: 79762-79945 bp Feature: domain Description: HHA Location: 79762-79945 bp Feature: gene Location: 80481-81965 bp Ori: APB48169.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80883-81573 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80883-81 573 bp Feature: gene Location: 82051-83187 bp Ori: APB48170.1 Feature: domain Description: INT_Cre_C Location: 82474-83128 bp Feature: domain Description: INT_Cre_C Location: 82474-831 28 bp Feature: gene Location: 83253-83570 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HHA (pfam05321), RVT-GII, INT_Cre_C (cd00799)

Seq: CP017928.1 Klebsiella oxytoca strain CAV1015 chromosome, complete genome (6155924 bp)
Overview 1 RT 1: 1068790-1073205 bp 2 RT 2: 1619085-1623761 bp 3 RT 3: 2048632-2054742 bp 4 RT 4: 2247591-2253542 bp 5 RT 5: 2639856-2654346 bp 6 RT 6: 4440358-4445607 bp 7 RT 7: 6089085-6095944 bp Neighborhood of RT #1 [1068790, 1073210] RVT-GII PRK10276 umuC Neighborhood of RT #2 [1619085, 1623761] umuC PRK10276 RVT-GII Neighborhood of RT #3 [2048632, 2054742] umuC PRK10276 RVT-GII PinE Neighborhood of RT #4 [2247591, 2253709] PRK10276 RVT-GII Pectate_lyase_3 Beta_helix Neighborhood of RT #5 [2639856, 2654678] YejM PRK10276 RVT-GII Peptidase_S74 COG4733 PRK09039 SMC_prok_B CBM_4_9 SMC_prok_B CBM_4_9 CBM_4_9 COG4733 Neighborhood of RT #6 [4440358, 4445636] PRK08178 PRK08155 RVT-GII TisB_tox Acetyltransf_10 Neighborhood of RT #7 [6089085, 6095944] Pectate_lyase_3 Beta_helix RVT-GII Feature: gene Location: 1068790-1068981 bp Feature: gene Location: 1069136-1069330 bp Feature: gene Location: 1069960-1071444 bp Ori: APB43287.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1070362-1071052 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1070362 -1071052 bp Feature: gene Location: 1071523-1071945 bp Ori: APB43288.1 Feature: domain Description: PRK10276 Location: 1071526-1071937 bp Feature: domain Description: PRK102 76 Location: 107152 6-1071937 bp Feature: gene Location: 1071945-1073210 bp Ori: APB43289.1 Feature: domain Description: umuC Location: 1071948-1073205 bp Feature: domain Description: umuC Location: 1071948-10732 05 bp Feature: gene Location: 1619085-1620353 bp Ori: APB43775.1 Feature: domain Description: umuC Location: 1619088-1620351 bp Feature: domain Description: umuC Location: 1619088-162 0351 bp Feature: gene Location: 1620355-1620774 bp Ori: APB43776.1 Feature: domain Description: PRK10276 Location: 1620358-1620769 bp Feature: domain Description: PRK102 76 Location: 162 0358-162 0769 bp Feature: gene Location: 1620856-1622340 bp Ori: APB43777.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1621258-1621948 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 162 12 58-162 1948 bp Feature: gene Location: 1623236-1623496 bp Feature: gene Location: 1623528-1623761 bp Feature: gene Location: 2048632-2049897 bp Ori: APB44131.1 Feature: domain Description: umuC Location: 2048635-2049895 bp Feature: domain Description: umuC Location: 2 048635-2 049895 bp Feature: gene Location: 2049899-2050318 bp Ori: APB47813.1 Feature: domain Description: PRK10276 Location: 2049902-2050313 bp Feature: domain Description: PRK102 76 Location: 2 049902 -2 050313 bp Feature: gene Location: 2050398-2051882 bp Ori: APB44132.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2050800-2051490 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 050800-2 051490 bp Feature: gene Location: 2052316-2052894 bp Ori: APB44133.1 Feature: domain Description: PinE Location: 2052319-2052862 bp Feature: domain Description: PinE Location: 2 052 319-2 052 862 bp Feature: gene Location: 2052970-2054742 bp Feature: gene Location: 2247591-2247920 bp Ori: APB44332.1 Feature: domain Description: PRK10276 Location: 2247603-2247885 bp Feature: domain Description: PRK102 76 Location: 2 2 47603-2 2 47885 bp Feature: gene Location: 2247920-2248159 bp Feature: gene Location: 2248237-2249721 bp Ori: APB44334.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2248639-2249329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 48639-2 2 4932 9 bp Feature: gene Location: 2250174-2251574 bp Feature: gene Location: 2251577-2253709 bp Ori: APB44336.1 Feature: domain Description: Pectate_lyase_3 Location: 2252390-2252870 bp Feature: domain Description: Pectate_lyase_3 Location: 2 2 52 390-2 2 52 870 bp Feature: domain Description: Beta_helix Location: 2253119-2253542 bp Feature: domain Description: Beta_helix Location: 2 2 53119-2 2 53542 bp Feature: gene Location: 2639856-2641616 bp Ori: APB44648.1 Feature: domain Description: YejM Location: 2639859-2641614 bp Feature: domain Description: YejM Location: 2 639859-2 641614 bp Feature: gene Location: 2641873-2642256 bp Ori: APB44649.1 Feature: domain Description: PRK10276 Location: 2641879-2642221 bp Feature: domain Description: PRK102 76 Location: 2 641879-2 642 2 2 1 bp Feature: gene Location: 2642363-2643847 bp Ori: APB44650.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2642765-2643455 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 642 765-2 643455 bp Feature: gene Location: 2644283-2645425 bp Ori: APB44651.1 Feature: domain Description: Peptidase_S74 Location: 2645099-2645252 bp Feature: domain Description: Peptidase_S74 Location: 2 645099-2 6452 52 bp Feature: gene Location: 2645466-2654678 bp Ori: APB44652.1 Feature: domain Description: COG4733 Location: 2645490-2648349 bp Feature: domain Description: COG4733 Location: 2 645490-2 648349 bp Feature: domain Description: PRK09039 Location: 2649126-2649321 bp Feature: domain Description: PRK09039 Location: 2 64912 6-2 64932 1 bp Feature: domain Description: SMC_prok_B Location: 2650425-2651037 bp Feature: domain Description: SMC_prok_B Location: 2 65042 5-2 651037 bp Feature: domain Description: CBM_4_9 Location: 2651238-2651454 bp Feature: domain Description: CBM_4_9 Location: 2 6512 38-2 651454 bp Feature: domain Description: SMC_prok_B Location: 2651541-2651769 bp Feature: domain Description: SMC_prok_B Location: 2 651541-2 651769 bp Feature: domain Description: CBM_4_9 Location: 2651823-2652198 bp Feature: domain Description: CBM_4_9 Location: 2 65182 3-2 652 198 bp Feature: domain Description: CBM_4_9 Location: 2652423-2652828 bp Feature: domain Description: CBM_4_9 Location: 2 652 42 3-2 652 82 8 bp Feature: domain Description: COG4733 Location: 2653761-2654346 bp Feature: domain Description: COG4733 Location: 2 653761-2 654346 bp Feature: gene Location: 4440358-4440648 bp Ori: APB46254.1 Feature: domain Description: PRK08178 Location: 4440361-4440646 bp Feature: domain Description: PRK08178 Location: 4440361-4440646 bp Feature: gene Location: 4440652-4442340 bp Ori: APB46255.1 Feature: domain Description: PRK08155 Location: 4440655-4442338 bp Feature: domain Description: PRK08155 Location: 4440655-4442 338 bp Feature: gene Location: 4442900-4444384 bp Ori: APB46256.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4443302-4443992 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4443302 -4443992 bp Feature: gene Location: 4445030-4445119 bp Ori: APB46257.1 Feature: domain Description: TisB_tox Location: 4445033-4445117 bp Feature: domain Description: TisB_tox Location: 4445033-4445117 bp Feature: gene Location: 4445190-4445636 bp Ori: APB46258.1 Feature: domain Description: Acetyltransf_10 Location: 4445298-4445607 bp Feature: domain Description: Acetyltransf_10 Location: 44452 98-4445607 bp Feature: gene Location: 6089085-6090857 bp Feature: domain Description: Pectate_lyase_3 Location: 6089538-6090018 bp Feature: domain Description: Pectate_lyase_3 Location: 6089538-6090018 bp Feature: domain Description: Beta_helix Location: 6090270-6090699 bp Feature: domain Description: Beta_helix Location: 60902 70-6090699 bp Feature: gene Location: 6090860-6092260 bp Feature: gene Location: 6092713-6094197 bp Ori: APB47668.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6093115-6093805 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6093115-6093805 bp Feature: gene Location: 6094515-6094841 bp Feature: gene Location: 6095261-6095944 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), umuC (PRK03609), PinE (COG1961), Pectate_lyase_3 (pfam12708), Beta_helix (pfam13229), YejM (COG3083), Peptidase_S74 (pfam13884), COG4733 (Phage-related protein, tail component ), PRK09039 (peptidoglycan -binding protein)
SMC_prok_B (TIGR02168), CBM_4_9 (pfam02018), PRK08178 (acetolactate synthase 1 small subunit), PRK08155 (acetolactate synthase large subunit), TisB_tox (TIGR04459), Acetyltransf_10 (pfam13673)