myRT

myRT report for GCA_001877035.1_ASM187703v1

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Seq: CP015756.1 Clostridium estertheticum subsp. estertheticum strain DSM 8809, complete genome (4760574 bp)
Overview 1 RT 1: 1953365-1964111 bp 2 RT 2: 2211627-2220411 bp Neighborhood of RT #1 [1953365, 1964113] PelB YSH1 RVT-GII RVT-GII GIIM RVT-GII GIIM M3B_PepF PRK02101 Neighborhood of RT #2 [2211627, 2220413] AcrR Lon RVT-GII RVT-GII GIIM RVT-GII GIIM ACT_1ZPV PRK05313 Feature: gene Location: 1953365-1955101 bp Ori: APC40172.1 Feature: domain Description: PelB Location: 1953728-1954955 bp Feature: domain Description: PelB Location: 1 953728-1 954955 bp Feature: gene Location: 1955891-1957489 bp Ori: APC40173.1 Feature: domain Description: YSH1 Location: 1955894-1957268 bp Feature: domain Description: YSH1 Location: 1 955894-1 957268 bp Feature: gene Location: 1957970-1958791 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1958321-1958792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 958321 -1 958792 bp Feature: gene Location: 1959344-1960588 bp Ori: APC40174.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1959548-1960205 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 959548-1 960205 bp Feature: domain Description: GIIM Note: maturase Location: 1960286-1960514 bp Feature: domain Description: GIIM Note: maturase Location: 1 960286-1 96051 4 bp Feature: gene Location: 1960641-1961252 bp Ori: APC40175.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1960671-1960809 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 960671 -1 960809 bp Feature: domain Description: GIIM Note: maturase Location: 1960866-1961085 bp Feature: domain Description: GIIM Note: maturase Location: 1 960866-1 961 085 bp Feature: gene Location: 1961458-1963263 bp Ori: APC40176.1 Feature: domain Description: M3B_PepF Location: 1961482-1963237 bp Feature: domain Description: M3B_PepF Location: 1 961 482-1 963237 bp Feature: gene Location: 1963349-1964113 bp Ori: APC40177.1 Feature: domain Description: PRK02101 Location: 1963352-1964111 bp Feature: domain Description: PRK021 01 Location: 1 963352-1 9641 1 1 bp Feature: gene Location: 2211627-2212190 bp Ori: APC40371.1 Feature: domain Description: AcrR Location: 2211642-2212038 bp Feature: domain Description: AcrR Location: 221 1 642-221 2038 bp Feature: gene Location: 2212240-2214627 bp Ori: APC40372.1 Feature: domain Description: Lon Location: 2212261-2214547 bp Feature: domain Description: Lon Location: 221 2261 -221 4547 bp Feature: gene Location: 2215082-2215903 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2215433-2215904 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 221 5433-221 5904 bp Feature: gene Location: 2216456-2217700 bp Ori: APC40373.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2216660-2217317 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 221 6660-221 731 7 bp Feature: domain Description: GIIM Note: maturase Location: 2217398-2217626 bp Feature: domain Description: GIIM Note: maturase Location: 221 7398-221 7626 bp Feature: gene Location: 2217753-2218364 bp Ori: APC40374.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2217783-2217921 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 221 7783-221 7921 bp Feature: domain Description: GIIM Note: maturase Location: 2217978-2218197 bp Feature: domain Description: GIIM Note: maturase Location: 221 7978-221 81 97 bp Feature: gene Location: 2218778-2219047 bp Ori: APC40375.1 Feature: domain Description: ACT_1ZPV Location: 2218784-2219042 bp Feature: domain Description: ACT_1 ZPV Location: 221 8784-221 9042 bp Feature: gene Location: 2219076-2220413 bp Ori: APC42657.1 Feature: domain Description: PRK05313 Location: 2219079-2220411 bp Feature: domain Description: PRK0531 3 Location: 221 9079-222041 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PelB (COG3866), YSH1 (COG1236), RVT-GII, GIIM (pfam08388), M3B_PepF (cd09610), PRK02101 (peroxide stress protein YaaA), AcrR (COG1309), Lon (COG0466), ACT_1ZPV (cd04872), PRK05313 (hypothetical protein; Provisional)