myRT

myRT report for GCA_001880185.2_ASM188018v2

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Seq: CP013155.2 Lactobacillus plantarum strain MF1298 plasmid pMF1298-5, complete sequence (37426 bp)
Overview 1 RT 1: 7868-14577 bp Neighborhood of RT #1 [7868, 14579] Tra8 RVT-UG8 RVT-UG3 PinE Dam Feature: gene Location: 7868-8716 bp Feature: gene Location: 8896-9825 bp Ori: AXN90893.1 Feature: domain Description: Tra8 Location: 8905-9814 bp Feature: domain Description: Tra8 Location: 8905-981 4 bp Feature: gene Location: 9840-11879 bp Ori: APD02875.2 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 10383-10827 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1 0383-1 0827 bp Feature: gene Location: 12124-13293 bp Ori: APD02874.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 12337-12757 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1 2337-1 2757 bp Feature: gene Location: 13697-14278 bp Ori: APD02873.1 Feature: domain Description: PinE Location: 13700-14255 bp Feature: domain Description: PinE Location: 1 3700-1 4255 bp Feature: gene Location: 14433-14579 bp Feature: domain Description: Dam Location: 14454-14577 bp Feature: domain Description: Dam Location: 1 4454-1 4577 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra8 (COG2826), RVT-UG8, RVT-UG3, PinE (COG1961), Dam (pfam05869)

Seq: CP013149.1 Lactobacillus plantarum strain MF1298, complete genome (3235952 bp)
Overview 1 RT 1: 1253226-1260181 bp Neighborhood of RT #1 [1253226, 1260228] COG4932 COG4932 RVT-GII P-type_ATPase_H eno Feature: gene Location: 1253226-1254200 bp Ori: APD00869.1 Feature: domain Description: COG4932 Location: 1253274-1253577 bp Feature: domain Description: COG4932 Location: 12 532 74-12 53577 bp Feature: domain Description: COG4932 Location: 1253634-1254195 bp Feature: domain Description: COG4932 Location: 12 53634-12 54195 bp Feature: gene Location: 1254304-1254513 bp Feature: gene Location: 1255393-1256413 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1255396-1255513 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 55396-12 55513 bp Feature: gene Location: 1256626-1258899 bp Ori: APD00871.1 Feature: domain Description: P-type_ATPase_H Location: 1256656-1258864 bp Feature: domain Description: P-type_ATPase_H Location: 12 56656-12 58864 bp Feature: gene Location: 1258939-1260228 bp Ori: APD00872.1 Feature: domain Description: eno Location: 1258951-1260181 bp Feature: domain Description: eno Location: 12 58951-12 60181 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4932 (Uncharacterized surface anchored protein ), RVT-GII, P-type_ATPase_H (cd02076), eno (TIGR01060)