myRT

myRT report for GCA_001885255.2_ASM188525v2

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Seq: CP018316.1 Klebsiella pneumoniae strain Kp_Goe_822579 plasmid pKp_Goe_579-4, complete sequence (61012 bp)
Overview 1 RT 1: 22785-27227 bp Neighborhood of RT #1 [22785, 27229] umuC PRK10276 RVT-GII InsA DDE_Tnp_IS1 Feature: gene Location: 22785-24056 bp Ori: APG80409.1 Gene: dinB_5 Feature: domain Description: umuC Location: 22788-24048 bp Feature: domain Description: umuC Location: 22788-24048 bp Feature: gene Location: 24056-24487 bp Ori: APG80410.1 Gene: lexA_6 Feature: domain Description: PRK10276 Location: 24107-24470 bp Feature: domain Description: PRK1 0276 Location: 241 07-24470 bp Feature: gene Location: 24896-26380 bp Ori: APG80411.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25298-25988 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25298-25988 bp Feature: gene Location: 26532-26807 bp Ori: APG80412.1 Feature: domain Description: InsA Location: 26538-26799 bp Feature: domain Description: InsA Location: 26538-26799 bp Feature: gene Location: 26852-27229 bp Ori: APG80413.1 Feature: domain Description: DDE_Tnp_IS1 Location: 26855-27227 bp Feature: domain Description: DDE_Tnp_IS1 Location: 26855-27227 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, InsA (COG3677), DDE_Tnp_IS1 (pfam03400)

Seq: CP018140.1 Klebsiella pneumoniae strain Kp_Goe_822579, complete genome (5381436 bp)
Overview 1 RT 1: 666254-669314 bp 2 RT 2: 3084723-3090024 bp Neighborhood of RT #1 [666254, 669314] DinI RVT-Retrons Neighborhood of RT #2 [3084723, 3090029] PRK15110 PRK09951 RVT-UG11 umuC PRK10276 Feature: gene Location: 666254-666694 bp Ori: APD42681.1 Gene: dinI_1 Feature: domain Description: DinI Location: 666509-666692 bp Feature: domain Description: DinI Location: 666509-666692 bp Feature: gene Location: 667123-667278 bp Feature: gene Location: 667601-668551 bp Ori: APD42683.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 667781-668324 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 667781-66832 4 bp Feature: gene Location: 668621-668980 bp Feature: gene Location: 669120-669314 bp Feature: gene Location: 3084723-3085688 bp Ori: APD44921.1 Gene: sapB Feature: domain Description: PRK15110 Location: 3084726-3085686 bp Feature: domain Description: PRK15110 Location: 308472 6-3085686 bp Feature: gene Location: 3085893-3086561 bp Ori: APD44922.1 Feature: domain Description: PRK09951 Location: 3085896-3086559 bp Feature: domain Description: PRK09951 Location: 3085896-3086559 bp Feature: gene Location: 3086762-3087670 bp Ori: APD44923.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 3087035-3087491 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 3087035-3087491 bp Feature: gene Location: 3088343-3089608 bp Ori: APD44924.1 Gene: dinB_1 Feature: domain Description: umuC Location: 3088346-3089606 bp Feature: domain Description: umuC Location: 3088346-3089606 bp Feature: gene Location: 3089610-3090029 bp Ori: APD44925.1 Gene: lexA_1 Feature: domain Description: PRK10276 Location: 3089613-3090024 bp Feature: domain Description: PRK102 76 Location: 3089613-309002 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DinI (pfam06183), RVT-Retrons, PRK15110 (peptide ABC transporter permease SapB), PRK09951 (hypothetical protein; Provisional), RVT-UG11, umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)