myRT

myRT report for GCA_001886555.1_ASM188655v1

Download annotations/find similar RTs

Seq: CP018115.1 Escherichia coli strain MRSN346638 chromosome, complete genome (4798436 bp)
Overview 1 RT 1: 317275-321664 bp 2 RT 2: 4686851-4692155 bp Neighborhood of RT #1 [317275, 321664] SH3_2 SH3_2 PHA02517 RVT-GII GIIM InsE PHA02517 RVT-GII Neighborhood of RT #2 [4686851, 4692157] PRK09678 RVT-Retrons Arm-DNA-bind_3 PHA02517 Feature: gene Location: 317275-317557 bp Feature: domain Description: SH3_2 Location: 317290-317353 bp Feature: domain Description: SH3_2 Location: 31 7290-31 7353 bp Feature: domain Description: SH3_2 Location: 317383-317500 bp Feature: domain Description: SH3_2 Location: 31 7383-31 7500 bp Feature: gene Location: 317600-318079 bp Feature: domain Description: PHA02517 Location: 317603-318077 bp Feature: domain Description: PHA0251 7 Location: 31 7603-31 8077 bp Feature: gene Location: 318163-319128 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 318190-318610 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 81 90-31 861 0 bp Feature: domain Description: GIIM Note: maturase Location: 318685-318883 bp Feature: domain Description: GIIM Note: maturase Location: 31 8685-31 8883 bp Feature: gene Location: 319159-319485 bp Ori: APE61912.1 Feature: domain Description: InsE Location: 319162-319483 bp Feature: domain Description: InsE Location: 31 91 62-31 9483 bp Feature: gene Location: 319485-320372 bp Ori: APE61913.1 Feature: domain Description: PHA02517 Location: 319545-320370 bp Feature: domain Description: PHA0251 7 Location: 31 9545-320370 bp Feature: gene Location: 320338-320475 bp Feature: gene Location: 320415-320984 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 320673-320985 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 320673-320985 bp Feature: gene Location: 320953-321378 bp Feature: gene Location: 321293-321664 bp Feature: gene Location: 4686851-4687123 bp Ori: APE65822.1 Feature: domain Description: PRK09678 Location: 4686860-4687016 bp Feature: domain Description: PRK09678 Location: 4686860-468701 6 bp Feature: gene Location: 4687769-4688737 bp Feature: gene Location: 4688739-4689671 bp Ori: APE65824.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4688841-4689435 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4688841 -4689435 bp Feature: gene Location: 4690126-4691267 bp Feature: domain Description: Arm-DNA-bind_3 Location: 4690135-4690387 bp Feature: domain Description: Arm-DNA-bind_3 Location: 46901 35-4690387 bp Feature: gene Location: 4691270-4692157 bp Ori: APE65825.1 Feature: domain Description: PHA02517 Location: 4691330-4692155 bp Feature: domain Description: PHA0251 7 Location: 4691 330-46921 55 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SH3_2 (pfam07653), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963), PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-Retrons, Arm-DNA-bind_3 (pfam13356)