myRT

myRT report for GCA_001886575.1_ASM188657v1

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Seq: CP018121.1 Escherichia coli strain MRSN346355 chromosome, complete genome (4794148 bp)
Overview 1 RT 1: 317275-321664 bp 2 RT 2: 4683635-4688939 bp Neighborhood of RT #1 [317275, 321664] SH3_2 SH3_2 PHA02517 RVT-GII GIIM InsE PHA02517 RVT-GII Neighborhood of RT #2 [4683635, 4688941] PRK09678 RVT-Retrons Arm-DNA-bind_3 PHA02517 Feature: gene Location: 317275-317557 bp Feature: domain Description: SH3_2 Location: 317290-317353 bp Feature: domain Description: SH3_2 Location: 31 7290-31 7353 bp Feature: domain Description: SH3_2 Location: 317383-317500 bp Feature: domain Description: SH3_2 Location: 31 7383-31 7500 bp Feature: gene Location: 317600-318079 bp Feature: domain Description: PHA02517 Location: 317603-318077 bp Feature: domain Description: PHA0251 7 Location: 31 7603-31 8077 bp Feature: gene Location: 318163-319128 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 318190-318610 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 81 90-31 861 0 bp Feature: domain Description: GIIM Note: maturase Location: 318685-318883 bp Feature: domain Description: GIIM Note: maturase Location: 31 8685-31 8883 bp Feature: gene Location: 319159-319485 bp Ori: APE66755.1 Feature: domain Description: InsE Location: 319162-319483 bp Feature: domain Description: InsE Location: 31 91 62-31 9483 bp Feature: gene Location: 319485-320372 bp Ori: APE66756.1 Feature: domain Description: PHA02517 Location: 319545-320370 bp Feature: domain Description: PHA0251 7 Location: 31 9545-320370 bp Feature: gene Location: 320338-320475 bp Feature: gene Location: 320415-320984 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 320673-320985 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 320673-320985 bp Feature: gene Location: 320953-321378 bp Feature: gene Location: 321293-321664 bp Feature: gene Location: 4683635-4683907 bp Ori: APE70657.1 Feature: domain Description: PRK09678 Location: 4683644-4683800 bp Feature: domain Description: PRK09678 Location: 4683644-4683800 bp Feature: gene Location: 4684553-4685521 bp Feature: gene Location: 4685523-4686455 bp Ori: APE70659.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4685625-4686219 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4685625-468621 9 bp Feature: gene Location: 4686910-4688051 bp Feature: domain Description: Arm-DNA-bind_3 Location: 4686919-4687171 bp Feature: domain Description: Arm-DNA-bind_3 Location: 468691 9-46871 71 bp Feature: gene Location: 4688054-4688941 bp Ori: APE70660.1 Feature: domain Description: PHA02517 Location: 4688114-4688939 bp Feature: domain Description: PHA0251 7 Location: 46881 1 4-4688939 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SH3_2 (pfam07653), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963), PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-Retrons, Arm-DNA-bind_3 (pfam13356)