myRT

myRT report for GCA_001886795.1_ASM188679v1

Download annotations/find similar RTs

Seq: CP017457.1 Legionella pneumophila subsp. fraseri strain Detroit-1 chromosome, complete genome (3515377 bp)
Overview 1 RT 1: 807280-811620 bp 2 RT 2: 2138139-2143943 bp Neighborhood of RT #1 [807280, 811673] HTH_23 HTH_33 InsE RVT-GII RVT_1 GIIM PHA02517 COG3547 Neighborhood of RT #2 [2138139, 2143943] ACH1 RVT-UG18 Feature: gene Location: 807280-807837 bp Feature: domain Description: HTH_23 Location: 807367-807490 bp Feature: domain Description: HTH_23 Location: 807367-807490 bp Feature: domain Description: HTH_33 Location: 807583-807748 bp Feature: domain Description: HTH_33 Location: 807583-807748 bp Feature: gene Location: 807930-808223 bp Ori: APF02503.1 Feature: domain Description: InsE Location: 807939-808203 bp Feature: domain Description: InsE Location: 807939-808203 bp Feature: gene Location: 808760-809914 bp Ori: APF02504.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 808964-809162 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 808964-8091 62 bp Feature: domain Description: RVT_1 Location: 809216-809534 bp Feature: domain Description: RVT_1 Location: 80921 6-809534 bp Feature: domain Description: GIIM Note: maturase Location: 809612-809831 bp Feature: domain Description: GIIM Note: maturase Location: 80961 2-809831 bp Feature: gene Location: 810020-810277 bp Ori: APF02505.1 Feature: domain Description: PHA02517 Location: 810023-810239 bp Feature: domain Description: PHA0251 7 Location: 81 0023-81 0239 bp Feature: gene Location: 810636-811673 bp Ori: APF02506.1 Feature: domain Description: COG3547 Location: 810654-811620 bp Feature: domain Description: COG3547 Location: 81 0654-81 1 620 bp Feature: gene Location: 2138139-2139452 bp Ori: APF03573.1 Feature: domain Description: ACH1 Location: 2138145-2139441 bp Feature: domain Description: ACH1 Location: 21 381 45-21 39441 bp Feature: gene Location: 2140258-2141271 bp Feature: gene Location: 2141769-2142131 bp Ori: APF03575.1 Feature: RT Description: RVT-UG18 Note: UG18 RT Location: 2141772-2142129 bp Feature: RT Description: RVT-UG1 8 Note: UG1 8 RT Location: 21 41 772-21 421 29 bp Feature: gene Location: 2142156-2142419 bp Feature: gene Location: 2142612-2143943 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_23 (pfam13384), HTH_33 (pfam13592), InsE (COG2963), RVT-GII, RVT_1 (pfam00078), GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), COG3547 (Transposase ), ACH1 (COG0427), RVT-UG18