myRT

myRT report for GCA_001887395.1_ASM188739v1

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Seq: CP013301.1 Vibrio cholerae strain C5 chromosome 1, complete sequence (2996195 bp)
Overview 1 RT 1: 2587513-2593797 bp Neighborhood of RT #1 [2587513, 2593797] PRK10578 PRK10621 RVT-Retrons COG3950 Feature: gene Location: 2587513-2588133 bp Ori: APF49928.1 Feature: domain Description: PRK10578 Location: 2587528-2588128 bp Feature: domain Description: PRK1 0578 Location: 2587528-25881 28 bp Feature: gene Location: 2589075-2589860 bp Ori: APF49929.1 Feature: domain Description: PRK10621 Location: 2589084-2589855 bp Feature: domain Description: PRK1 0621 Location: 2589084-2589855 bp Feature: gene Location: 2590346-2591293 bp Ori: APF49930.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2590460-2591057 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2590460-2591 057 bp Feature: gene Location: 2591294-2592916 bp Ori: APF49931.1 Feature: domain Description: COG3950 Location: 2591480-2592911 bp Feature: domain Description: COG3950 Location: 2591 480-259291 1 bp Feature: gene Location: 2593651-2593797 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10578 (hypothetical protein; Provisional), PRK10621 (hypothetical protein; Provisional), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence )

Seq: CP013302.1 Vibrio cholerae strain C5 chromosome 2, complete sequence (1105843 bp)
Overview 1 RT 1: 344667-348922 bp Neighborhood of RT #1 [344667, 348922] Nudix_Hydrolase_7 RVT-UG14 Feature: gene Location: 344667-345188 bp Ori: APF50661.1 Feature: domain Description: Nudix_Hydrolase_7 Location: 344763-345156 bp Feature: domain Description: Nudix_Hydrolase_7 Location: 344763-345156 bp Feature: gene Location: 345349-345696 bp Feature: gene Location: 345837-347402 bp Ori: APF50663.1 Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 346272-346749 bp Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 3462 72 -346749 bp Feature: gene Location: 347538-348098 bp Feature: gene Location: 348248-348922 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Nudix_Hydrolase_7 (cd04664), RVT-UG14